DY258673 | Citrus Genome Database

Overview


Name	DY258673
Unique Name	DY258673
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1160

Libraries


Library Name	Type
AbsDev1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_MOUSE (V-type proton ATPase catalytic subunit A OS=Mus musculus GN=Atp6v1a PE=1 SV=2)

HSP 1 Score: 439.113 bits (1128), Expect = 2.316e-122
Identity = 231/343 (67.35%), Postives = 264/343 (76.97%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR  RPV+ KL A+ PLLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + DG+ ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY++A+
Sbjct:  211 VRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEV-DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMISFYDMAR 552

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_MANSE (V-type proton ATPase catalytic subunit A OS=Manduca sexta GN=VHAA PE=2 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 2.316e-122
Identity = 229/343 (66.76%), Postives = 265/343 (77.26%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLY-SI*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR PRPV+ KL A+ PLLTGQRVLD+LFP V GGT AIPGAFGCGKTVISQALSKYSNSD ++YVGCGERGNEM+EVL DFP+LT+ + +G  ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG P+R GSV+IVGAVSPPGGDFSDPVT+ATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY +             +  R +++              L  +    + +KI   +        L +  Y S  +FCPF ++V +  NII FY++++
Sbjct:  211 VRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTVEI-EGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPDREGSVSIVGAVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYEKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIISFYDMSR 552

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_HUMAN (V-type proton ATPase catalytic subunit A OS=Homo sapiens GN=ATP6V1A PE=1 SV=2)

HSP 1 Score: 439.113 bits (1128), Expect = 2.316e-122
Identity = 231/343 (67.35%), Postives = 264/343 (76.97%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR  RPV+ KL A+ PLLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + DG+ ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY++A+
Sbjct:  211 VRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEV-DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_BOVIN (V-type proton ATPase catalytic subunit A OS=Bos taurus GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 439.113 bits (1128), Expect = 2.316e-122
Identity = 231/343 (67.35%), Postives = 264/343 (76.97%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR  RPV+ KL A+ PLLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + DG+ ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY++A+
Sbjct:  211 VRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEV-DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMAR 552

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_CHICK (V-type proton ATPase catalytic subunit A OS=Gallus gallus GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 438.343 bits (1126), Expect = 3.951e-122
Identity = 231/341 (67.74%), Postives = 262/341 (76.83%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNL 1020
            VR  RPV+ KL A+ PLLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + DG+ ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY++
Sbjct:  211 VRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEV-DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYTRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDM 550

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_CAEBR (V-type proton ATPase catalytic subunit A OS=Caenorhabditis briggsae GN=vha-13 PE=3 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 1.150e-121
Identity = 230/343 (67.06%), Postives = 262/343 (76.38%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR PRPV+ KLAA+ PLL GQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + +G   S+MKRT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRL EMPADSGYPAYLAARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY+LA+
Sbjct:  200 VRNPRPVTEKLAANNPLLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDAIIYVGCGERGNEMSEVLRDFPELTMEV-NGTTTSIMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALEEFYEKNYPEFVHLRTKCKEILQEEEDLSEIVQLVGKASLAESDKITLEVAKIIKDDFLQQNGYTPYDRFCPFYKTVGMLKNMIGFYDLAR 541

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_PIG (V-type proton ATPase catalytic subunit A OS=Sus scrofa GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 436.032 bits (1120), Expect = 1.961e-121
Identity = 231/343 (67.35%), Postives = 263/343 (76.68%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR  RPV+ KL A+ PLLTGQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGER NEM+EVL DFP+LTM + DG+ ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMA+STSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY +             +  R + +              L  +    + +KI   +        L +  Y+   +FCPF ++V +  N+I FY+LA+
Sbjct:  211 VRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERVNEMSEVLRDFPELTMEV-DGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMANSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDLAR 552

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_CAEEL (V-type proton ATPase catalytic subunit A OS=Caenorhabditis elegans GN=vha-13 PE=1 SV=3)

HSP 1 Score: 436.032 bits (1120), Expect = 1.961e-121
Identity = 228/343 (66.47%), Postives = 264/343 (76.97%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR+PRPV+ KLAA+ PLL GQRVLDALFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD ++YVGCGERGNEM+EVL DFP+LTM + +G   S+MKRT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRL EMPADSGYPAYLAARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYS+Y +             ++ R + +              L  +    + +K+   +        L +  Y+   +FCPF ++V +  N+I FY+LA+
Sbjct:  200 VRSPRPVTEKLAANNPLLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDAIIYVGCGERGNEMSEVLRDFPELTMEV-EGVTTSIMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNYPEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGFYDLAR 541

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA1_DROME (V-type proton ATPase catalytic subunit A isoform 1 OS=Drosophila melanogaster GN=Vha68-1 PE=2 SV=2)

HSP 1 Score: 433.721 bits (1114), Expect = 9.732e-121
Identity = 227/343 (66.18%), Postives = 260/343 (75.80%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ 1026
            VR PRPV+ KL A+ PL TGQRVLD+LFP V GGT AIPGAFGCGKTVISQALSKYSNSD ++YVGCGERGNEM+EVL DFP+LT  + DG  ES+MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNV+MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLA+FYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY +             +  R +++              L  +    + +K+   +        L +  YS   + CPF ++V +  NI+ FY  A+
Sbjct:  208 VRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEI-DGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQNSYSPYDRVCPFYKTVGMLRNIMAFYETAR 549

[Close]

BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: VATA_DICDI (V-type proton ATPase catalytic subunit A OS=Dictyostelium discoideum GN=vatA PE=1 SV=2)

HSP 1 Score: 429.098 bits (1102), Expect = 2.397e-119
Identity = 231/362 (63.81%), Postives = 266/362 (73.48%), Query Frame = 1

Query:    1 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQH*SLSMSNLIRILLTSRQRLEXXXXXXXXXXXXXHLSERMLWLKENKIR*RLLSF*GRTILLRTLYS-I*QFCPFLQSVWIKPNIIPFYNLAQ*AEKKG---NWVRKGQKKN 1074
            VR+ RPV  KL  + PLLTGQRVLD+LFP V GGTCAIPGAFGCGKTVISQ+LSK+SNSD +VYVGCGERGNEMAEVLM+FP+L   + D +EE +M+RT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+V C+G P R GSVTIVGAVSPPGGDF+DPVT+ATL IVQVFWGLDKKLAQRKHFPS+NWLIS+SKY Q        +    +  R R +              L  +    +  KI   +        L +  +S   + CPF ++VW+  N++ FYNLAQ A +     N V   Q KN
Sbjct:  212 VRSARPVIEKLPCNYPLLTGQRVLDSLFPCVQGGTCAIPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLMEFPELHTKVGD-KEEPIMQRTCLVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVSCIGHPTRIGSVTIVGAVSPPGGDFADPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISFSKYMQALDTHYDQMDPEFVPLRTRAKEILQMEEDLSEIVQLVGQDSLGESEKITIEVARIIRDDFLQQNGFSPYDKCCPFFKTVWMLKNMMTFYNLAQKAVESSTADNKVTWNQIKN 572

The following BLAST results are available for this feature:

BLAST of DY258673 vs. ExPASy Swiss-Prot

BLAST of DY258673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
VATA_MOUSE	2.316e-122	67.35	V-type proton ATPase catalytic subunit A OS=Mus mu...	[more]
VATA_MANSE	2.316e-122	66.76	V-type proton ATPase catalytic subunit A OS=Manduc...	[more]
VATA_HUMAN	2.316e-122	67.35	V-type proton ATPase catalytic subunit A OS=Homo s...	[more]
VATA_BOVIN	2.316e-122	67.35	V-type proton ATPase catalytic subunit A OS=Bos ta...	[more]
VATA_CHICK	3.951e-122	67.74	V-type proton ATPase catalytic subunit A OS=Gallus...	[more]
VATA_CAEBR	1.150e-121	67.06	V-type proton ATPase catalytic subunit A OS=Caenor...	[more]
VATA_PIG	1.961e-121	67.35	V-type proton ATPase catalytic subunit A OS=Sus sc...	[more]
VATA_CAEEL	1.961e-121	66.47	V-type proton ATPase catalytic subunit A OS=Caenor...	[more]
VATA1_DROME	9.732e-121	66.18	V-type proton ATPase catalytic subunit A isoform 1...	[more]
VATA_DICDI	2.397e-119	63.81	V-type proton ATPase catalytic subunit A OS=Dictyo...	[more]

Pages

Properties


Property Name	Value
Genbank description	KN0AAI2DH11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY258673 ID=DY258673; Name=DY258673; organism=Citrus clementina; type=EST; length=1160bp
GTACGTACCCCAAGGCCTGTTTCATCAAAGCTTGCTGCTGATACTCCACT
GCTTACAGGACAGCGTGTTCTTGATGCCCTTTTCCCTTCAGTTCTTGGTG
GGACTTGTGCTATTCCTGGAGCATTTGGTTGTGGCAAAACTGTTATTAGT
CAAGCTCTCTCTAAGTACTCCAATTCTGATACTGTTGTTTATGTTGGTTG
TGGGGAGCGAGGAAATGAAATGGCAGAGGTGCTTATGGATTTTCCTCAAT
TGACAATGACATTGCCTGATGGCCGTGAAGAATCTGTCATGAAGCGTACA
ACACTTGTGGCCAACACTTCTAACATGCCTGTGGCTGCTCGTGAGGCTTC
GATTTATACAGGAATCACCATAGCTGAATATTTCAGAGATATGGGGTACA
ATGTTAGCATGATGGCAGATTCAACTTCTCGTTGGGCAGAAGCGTTGCGT
GAAATTTCAGGACGGCTGGCAGAAATGCCTGCAGATAGTGGATATCCTGC
TTACCTGGCTGCACGTTTGGCCTCATTTTATGAACGTGCTGGGAAAGTTA
AATGTCTTGGTGGACCAGAACGTACTGGTAGTGTCACAATTGTTGGTGCA
GTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTGTAACATCTGCCACCCT
CAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAGAAACTTGCGCAGAGAA
AGCATTTTCCTTCTGTAAACTGGCTTATTTCTTACTCGAAGTATCAACAG
CATTAGAGTCTTTCTATGAGCAATTTGATCCGGATTTTATTAACATCAAG
ACAAAGGCTAGAGAGGTGCTGCAGAAAGAAGATGAACTGAATGAAAATGT
GCCACTTGTCCGAAAGGATGCTTTGGCTGAAGGAAAATAAAATACGCTAG
AGACTGCTAAGCTTTTGAGGGAGGACTATCTTGCTCAGAACGCTTTACTC
CATATGACAGTTCTGCCCTTTCCTACAGTCTGTTTGGATAAAGCCTAACA
TTATCCCTTTCTATAACTTGGCCCAATAGGCCGAAAAAAAAGGGAACTGG
GTAAGGAAGGGGCAAAAAAAAAACTAAACCCCCCTTTCAACCACCTCCGC
GGGGGGAAAATTATATTTTTAACAAAAAAAAAATTCCCAAAAAAATTTTA
GAAAAACCCA