DY258673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_DEHE1 (ATP synthase subunit beta OS=Dehalococcoides ethenogenes (strain 195) GN=atpD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.351e-20 Identity = 75/247 (30.36%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 16 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 P +L + +L TG +V+D + P GG G G GKTV+ Q L + + V+ G GER E ++ + + V+ +TT+V N A R TG+T+AEYFRD +V + D+ R+ A E+S L MP+ GY LA + + ER K GS+T AV P D++DP AT + L++ LA++ +P+V+ L S S+ Sbjct: 115 PAMDELESSAQVLETGLKVIDLIAPFARGGKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEM----------EDSGVLPKTTMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRMPSAVGYQPTLATEMGALQERIASTK-------QGSITSFQAVYVPADDYTDPGVVATFGHLDAMIALERSLAEQALYPAVDPLASNSR 344
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.351e-20 Identity = 70/237 (29.54%), Postives = 115/237 (48.52%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L+TG +V+D L P GG + G G GKTV+ L ++ V+ G GER GN++ +++ ++ + + S + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP +A+ + + L + +A++ +P+V+ L S S+ Sbjct: 128 LVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIE-SKVNVDPHENNGSSAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------TKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSR 356
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_ACICJ (ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.351e-20 Identity = 75/238 (31.51%), Postives = 117/238 (49.16%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L+TG +V+D L P + GG + G G GKTV+ Q L + V+ G GER GN++ ++D + L +G E + LV N P AR +G+T+AEYFRD G +V D+ R+ +A E+S L +P+ GY LA + + ER K GS+T V A+ P D +DP + + S + L++ +A++ +P+V+ L S S+ Sbjct: 129 LVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAG--VIKLGEGTTEG--SKVALVYGQMNEPPGARMRVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTK-------KGSITSVQAIYVPADDLTDPAPATSFSHLDATTTLNRAIAEKGIYPAVDPLDSTSR 355
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: FLII_ECOLI (Flagellum-specific ATP synthase OS=Escherichia coli (strain K12) GN=fliI PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 70/229 (30.57%), Postives = 115/229 (50.22%), Query Frame = 1 Query: 55 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 TG R ++AL G + G GK+V+ +++Y+ +D +V GERG E+ + + + + +GR SV+ + A P+ + + Y IAE FRD G +V ++ DS +R+A A REI+ + E PA GYP + A+L + ERAG G GS+T V G D DP+ + +I+ L ++LA+ H+P+++ S S+ Sbjct: 161 TGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIEN-----ILGAEGRARSVV----IAAPADVSPLLRMQGAAYA-TRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG-----NGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISR 374
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 72/254 (28.35%), Postives = 120/254 (47.24%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P P ++ A + +L TG +V+D L P GG + G G GKTV+ L ++ V+ G GER GN++ +++ + + + + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP +A+ + + L + +A++ +P+V+ L S S+ Sbjct: 111 IHQPAPSYAEQATEAEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE-SNVNKDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------TKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSR 356
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_THIDA (ATP synthase subunit beta OS=Thiobacillus denitrificans (strain ATCC 25259) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 76/246 (30.89%), Postives = 112/246 (45.53%), Query Frame = 1 Query: 16 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 P + AA +L TG +V+D + P GG + G G GKTV L + +S V+ G GER E + + +E V+ + LV N P R TG+T+AEYFRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T AV P D +DP + T + + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYADQAATVEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVQHSGFSVFAGVGERTREGNDFYHEM----------KEGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQERITSTK-------TGSITSFQAVYVPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDSTSR 341
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_THEAB (ATP synthase subunit beta OS=Thermosipho africanus (strain TCF52B) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 76/250 (30.40%), Postives = 114/250 (45.60%), Query Frame = 1 Query: 4 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P ++ + + L TG +V+D L P GG G G GKTV+ L + + ++ G GER E E+ +D +E V+ T LV N P AR T +T+AEYFRD+ G +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V A+ P D +DP + T + + L ++ A +P+V+ L S SK Sbjct: 118 KAPPSITEQSTSVEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDM----------QEAEVLDNTVLVFGQMNEPPGARFRVALTALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATDMGELQERITSTK-------KGSITSVQAIYVPADDITDPAPATTFTHLDATVVLSRRRAALGLYPAVDPLDSTSK 350
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_SYNJA (ATP synthase subunit beta OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 78/253 (30.83%), Postives = 113/253 (44.66%), Query Frame = 1 Query: 4 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL---SKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQ 750 R+ P P TG +V+D L P GG + G G GKTV+ Q L +S V+ G GER E ++ + +E V+ + LV N P AR T +T+AEYFRD+ +V + D+ R+ +A E+S L MP+ GY LA + + ER K GS+T V AV P D +DP + T + + L + LA + +P+V+ L S S Q Sbjct: 125 RSAPPFVELTVKPEPFETGIKVIDLLAPFKRGGKVGLFGGAGVGKTVLIQELIHNIAEEHSGLSVFAGVGERTREGNDLYNEM----------KESGVLDKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERITSTK-------QGSITSVQAVYVPADDLTDPAPATTFAHLDSTVVLSRSLAAKGIYPAVDPLDSSSTILQ 360
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_SODGM (ATP synthase subunit beta OS=Sodalis glossinidius (strain morsitans) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 78/251 (31.08%), Postives = 118/251 (47.01%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P P +LA+ LL TG +V+D + P GG + G G GKTV L + +S V+ G GER E + + ++T + +V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ Sbjct: 110 IHRPAPSYEELASSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDF---YHEMT-------DSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_CYTLY (ATP synthase subunit beta OS=Cytophaga lytica GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 79/256 (30.86%), Postives = 119/256 (46.48%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTM---------TLPDGR------EESVMK--RTTLVANTSNMPVAAREASIYTGITIAEYFRD-----MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L TG +V+D + P GG + G G GKTV+ Q L + V+ G GER E ++L + + + ++ +G ++SVMK + T V N P AR +G+TIAEYFRD G +V D+ R+ +A E+S L MP+ GY LA + + ER K GS+T V AV P D +DP + T + + L +K+A+ +P+V+ L S S+ Sbjct: 133 LFTGIKVIDLIEPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGDDFMHSMEEGGWDLSKVDKSVMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAGEGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERITSTK-------RGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSR 381 The following BLAST results are available for this feature:
BLAST of DY258673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258673 ID=DY258673; Name=DY258673; organism=Citrus clementina; type=EST; length=1160bpback to top |