DY258673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 72/235 (30.64%), Postives = 112/235 (47.66%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L TG +V+D L P GG + G G GKTV+ L + + V+ G GER E ++ + E V+++T LV N P +R TG+T+AEYFRD +G +V + D+ R+ +A E+S L +P+ GY LA + + ER K GS+T V AV P D +DP + T + + L + + ++ +P+V+ L S S+ Sbjct: 130 LETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEM----------NESGVIEKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTK-------KGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRHIVEQGIYPAVDPLDSTSR 347
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 76/250 (30.40%), Postives = 114/250 (45.60%), Query Frame = 1 Query: 4 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 R P+ + L TG +V+D L P + GG + G G GKTVI L + V+ G GER E ++ + +E V+ +T +V N P R TG+T+AEYFRD G +V + D+ R+ +A E+S L MP+ GY LA + ER R GS+T V AV P D +DP + T + + L +++A+ +P+V+ L S S+ Sbjct: 120 RPAPPLEEQSTRAEILETGIKVIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEM----------KEAGVLDKTIMVFGQMNEPPGVRLRVGLTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITST-------RKGSITSVQAVYVPADDLTDPAPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 352
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_AZOPC (ATP synthase subunit beta OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=atpD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 78/256 (30.47%), Postives = 118/256 (46.09%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL----SKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMT-----LPDGR------------EESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM----GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L TG +V+D L P + GG + G G GKTV+ L +K N +V + G GER E ++L + + + +G EE + TLV N P AR + + +G+TIAE FRD G++V D+ R+ +A E+S L MP+ GY LA + ER K GS+T + AV P D +DP + T + + LD+K+ + +P+V+ L S S+ Sbjct: 132 LFTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKKHNGFSV-FAGVGERTREGNDLLREMIESGVIRYGKEFEEGMRLGEWDLSKIDYEELKKSQATLVFGQMNEPPGARSSVVLSGLTIAEAFRDQSGSDGHDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKMQERITSTK-------NGSITSIQAVYVPADDLTDPAPATTFTFLDATTVLDRKIFELGIYPAVDPLNSVSR 379
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB1_MYCPU (ATP synthase subunit beta 1 OS=Mycoplasma pulmonis GN=atpD1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.682e-20 Identity = 75/238 (31.51%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 49 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 L TG +V+D L P GG + G G GKTV+ Q L + V+ G GER GN++ ++ V+ +TTLV N P AR TG+T+AEYFRD +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V AV P D +DP + T + + L++ +A +P+++ L S S+ Sbjct: 130 LETGIKVIDLLVPYSKGGKIGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGVGERTREGNDLYHEMI-------------ASGVLDKTTLVFGQMNEPPGARMRVALTGLTMAEYFRDKFKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTK-------NGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVLERNIAALGIYPAIDPLASSSR 347
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic OS=Porphyra purpurea GN=atpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 77/255 (30.20%), Postives = 117/255 (45.88%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYQQ 750 + P P +KL + TG +V+D L P GG + G G GKTV+ L ++ V+ G GER E ++ M+ + + D +ES + LV N P AR T +T+AEYFRD+ +V + D+ R+ +A E+S L MP+ GY LA + + ER GS+T + AV P D +DP + T + + L + LA + +P+V+ L S S Q Sbjct: 115 IHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNLKES---KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTT-------EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQ 359
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_PARUW (ATP synthase subunit beta OS=Protochlamydia amoebophila (strain UWE25) GN=atpD PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 71/233 (30.47%), Postives = 113/233 (48.50%), Query Frame = 1 Query: 55 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY-NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 TG +V+D L P GG + G G GK+VI L + V+ G GER E ++ ++ +E ++ +T+LV N P AR TG+T+AE+FRD + NV + D+ R+ +A E+S L MP+ GY LA+ + S ER K GS+T V A+ P D++DP ++ + L +++A+ +P+V+ L S S+ Sbjct: 131 TGIKVIDLLCPYTKGGKVGLFGGAGVGKSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEM----------KESGILSKTSLVFGQMNEPPGARMRVGLTGLTMAEHFRDQEHQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEIGSLQERITSTK-------HGSITSVQAIYVPADDYTDPAPASIFPHLDAATTLSRQIAELGIYPAVDPLNSSSR 346
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_MYCPE (ATP synthase subunit beta OS=Mycoplasma penetrans GN=atpD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 74/236 (31.36%), Postives = 112/236 (47.46%), Query Frame = 1 Query: 55 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 TG +V+D L P V GG + G G GKTV+ Q L + ++ G GER GN++ ++D V+ +T LV N P AR T +T+AE+FR+ +V + D+ R+++A E+S L +P+ GY LA + ER K +GS+T V AV P D +DP S T + + LD+K+A +P++N L S S+ Sbjct: 426 TGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSIFAGVGERTREGNDLYHEMID-------------GGVINQTALVFGQMNEPPGARMRVALTALTMAEHFRENNKQDVLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLAFEMGQLQERITSTK-------SGSITSVQAVYVPADDLTDPAPSTTFAHLDAKTVLDRKIASLGIYPAINPLESSSR 641
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_FERIS (ATP synthase subunit beta OS=Fervidobacterium islandicum GN=atpD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 75/252 (29.76%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P P ++ + +L TG +V+D L P GG G G GKTV+ + + + ++ G GER E ++ ++ E V+ T LV N P AR T +TIAEYFRD+ G +V + D+ R+ +A E+S L MP+ GY L+ + ER K GS+T V A+ P D +DP + T + + L ++LA +P+V+ L S SK Sbjct: 115 IHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEMT----------EAGVLNNTVLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTDMGELQERITSTK-------KGSITSVQAIYVPADDITDPAPATTFTHLDATIVLSRQLAALGLYPAVDPLDSTSK 349
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_COXBR (ATP synthase subunit beta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 76/251 (30.28%), Postives = 116/251 (46.22%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P P + + T LL TG +V+D L P GG + G G GKTV L + +S V+ G GER E + + +E +V+ + LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + + ER K GS+T + AV P D +DP + T + + L +++A+R +P+++ L S S+ Sbjct: 111 IHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM----------KESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGALQERITSTK-------KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSR 344
BLAST of DY258673 vs. ExPASy Swiss-Prot
Match: ATPB_CHLT3 (ATP synthase subunit beta OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=atpD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.421e-20 Identity = 77/255 (30.20%), Postives = 116/255 (45.49%), Query Frame = 1 Query: 1 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 741 + P P +L+ + TG +V+D L P GG + G G GKTV+ L S V+ G GER GN++ E + +E V+ +T LV N P AR T ++IAEYFRD +V + D+ R+ +A E+S L MP+ GY LA + + ER K GS+T V A+ P D +DP + T + + L + +A+ +P+V+ L S S+ Sbjct: 111 IHRPSPAFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEM-------------KESGVIDKTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERIVSTK-------KGSITSVQAIYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDSTSR 345 The following BLAST results are available for this feature:
BLAST of DY258673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258673 ID=DY258673; Name=DY258673; organism=Citrus clementina; type=EST; length=1160bpback to top |