DY258677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METJA (50S ribosomal protein L3P OS=Methanocaldococcus jannaschii GN=rpl3p PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.068e-38 Identity = 87/213 (40.85%), Postives = 129/213 (60.56%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFG 658 VRVL HT K+ L +KK ++EI++ G I E+++YA KQ+ + VFQ+ E++D IGVTKGKG++G V RWGV + + +G+ R V IG W P V ++V GQ GYH RTE NK++ K+G G E ITP GGF HYG+++++Y+++KG GP KR++ LR+++ Q + + E I +I T+SK G Sbjct: 139 VRVLVHTN-PKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPE--ITYISTTSKQG 334
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_PYRKO (50S ribosomal protein L3P OS=Pyrococcus kodakaraensis GN=rpl3p PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.181e-37 Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSK 652 VR+L HTQ + GLK KK +ME + G + K DYA K++ V + E++D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G+ D E +ITP GGFPHYGIV+ D+LMI+G G KR++ +R ++ + +E +I ++ SK Sbjct: 143 VRLLVHTQ-PWLIGLK-KKPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------LVLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_THEGJ (50S ribosomal protein L3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.014e-37 Identity = 85/211 (40.28%), Postives = 122/211 (57.82%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSK 652 VR+L HTQ +K +KK +ME + G + K +YA K+I V + E++D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G+ G E DITP GGFPHYGI++ D+LMI+G G KR++ +R ++ + +E +I ++ SK Sbjct: 143 VRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLNG------NEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKRIIRVRPAIKPPKKKPPVERPQITYVSRESK 345
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.435e-37 Identity = 85/213 (39.91%), Postives = 123/213 (57.75%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFG 658 +RVLAHT R + G+ +K +MEI V G ++ E++ A G Q+ V +F E ID+ VTKGKG +G V RWG+ RK R LR V +G WHPAR+S+ V + GQ GYH RTE NK++ +G G DITP GGF YG+V+++Y++IKG GP KR+V +R++ ++ + A + +I ++ SK G Sbjct: 137 IRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLRHVGNLGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNG--------------TDITPDGGFVGYGVVRNEYMLIKGSVPGPVKRLVRMRRA-IRPGAAFAPKAPQILYVSKESKQG 334
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_THEON (50S ribosomal protein L3P OS=Thermococcus onnurineus (strain NA1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.486e-37 Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSK 652 VR+L HTQ +K +KK +ME + G + K DYA K++ V + E++D+I VTKGKG +G V RWG+ K R R V +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ G+ + ++ E +ITP GGFPHYGI++ D+LMI+G G KR++ +R ++ + +E +I +I SK Sbjct: 143 VRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKIQFHKAQRAGKGRHVGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK-----LKLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYISRESK 346
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_ARCFU (50S ribosomal protein L3P OS=Archaeoglobus fulgidus GN=rpl3p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.994e-37 Identity = 83/220 (37.73%), Postives = 130/220 (59.09%), Query Frame = 2 Query: 5 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFG 658 ++ AS VRV+ +TQ + G+ +K +ME ++ GG + E +DYA K+I V VF + +ID+I VTKGKG++G V RWGV L K R R+V +G W+P V +TV +AGQ G+H RTE NK++ K+G+ G+E ITP GGF HYG+++ Y+++ G GP KR++ +R ++ + + + + I ++ T+SK G Sbjct: 128 VENGASEVRVVTYTQPYLITGVPKKVPDVMEHRI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METM7 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl3p PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.705e-36 Identity = 85/217 (39.17%), Postives = 125/217 (57.60%), Query Frame = 2 Query: 17 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGH 661 A+ VRV+ HT K G+ +KK ++EI++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E ITP GGF +YG VK+ Y+++KG GP KR+V LR S+ + L E + +I T SK G+ Sbjct: 135 ATEVRVIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPE--VAYISTESKQGN 334
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METVS (50S ribosomal protein L3P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl3p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.908e-36 Identity = 86/214 (40.19%), Postives = 124/214 (57.94%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGH 661 +RV+ HT K G+ +KK ++EI+V G ++AEK+ YA K + ++ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV +TV AGQ G+H RTE NK++ KLG G E ITP GGF +YG VK+ Y+++KG GP KR+V LR ++ + L E + +I SK G+ Sbjct: 138 LRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPE--VTYISKESKQGN 334
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METVA (50S ribosomal protein L3P OS=Methanococcus vannielii GN=rpl3p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.908e-36 Identity = 86/214 (40.19%), Postives = 124/214 (57.94%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGH 661 +RV+ HT K G+ +KK ++EI+V G ++AEK+ YA K + ++ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV +TV AGQ G+H RTE NK++ KLG G E ITP GGF +YG VK+ Y+++KG GP KR+V LR ++ + L E + +I SK G+ Sbjct: 138 LRVIVHTN-PKTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPE--VTYISKESKQGN 334
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METMP (50S ribosomal protein L3P OS=Methanococcus maripaludis GN=rpl3p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.798e-36 Identity = 85/217 (39.17%), Postives = 124/217 (57.14%), Query Frame = 2 Query: 17 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGH 661 A+ VR + HT K G+ +KK ++EI++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E ITP GGF +YG VK+ Y+++KG GP KR+V LR S+ + L E I +I T SK G+ Sbjct: 135 ATEVRAIVHTN-PKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPE--IAYISTESKQGN 334 The following BLAST results are available for this feature:
BLAST of DY258677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258677 ID=DY258677; Name=DY258677; organism=Citrus clementina; type=EST; length=882bpback to top |