DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BUCAI (Spermidine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=speE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 4.505e-21 Identity = 43/103 (41.75%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPD 629 +EK+L++ K+ + VM+F++S +GK++++D ++Q TERDE Y EM+TH+P+ + + K+VL+IGGGDG +LRE+ R+ +E + EID + K++FP+ Sbjct: 21 IEKMLYKKKTPHHQVMIFKNSVFGKIMVIDDIVQTTERDEFIYHEMLTHVPIIAHGSIKSVLIIGGGDGGILREVCRYKMIENITMVEIDVNIIDLCKKYFPN 123
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BUCA5 (Spermidine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=speE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 4.505e-21 Identity = 43/103 (41.75%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPD 629 +EK+L++ K+ + VM+F++S +GK++++D ++Q TERDE Y EM+TH+P+ + + K+VL+IGGGDG +LRE+ R+ +E + EID + K++FP+ Sbjct: 21 IEKMLYKKKTPHHQVMIFKNSVFGKIMVIDDIVQTTERDEFIYHEMLTHVPIIAHGSIKSVLIIGGGDGGILREVCRYKMIENITMVEIDVNIIDLCKKYFPN 123
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PHOLL (Spermidine synthase OS=Photorhabdus luminescens subsp. laumondii GN=speE PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 5.884e-21 Identity = 46/112 (41.07%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+K+L+ K+++Q++++F+++T G+++ LDG +Q TERDE Y EM+ H+PL + N K VL+IGGGDG +LRE+ RH +E + EID + +Q+ P+ D P Sbjct: 21 VDKVLYHDKTEHQDLIIFENATLGRIMALDGTVQTTERDEFIYHEMMAHVPLFAHGNAKRVLIIGGGDGGMLREVCRHQYLESITMVEIDAGVVEFCRQYLPNHNAGAYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK5 (Spermidine synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=speE PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.685e-21 Identity = 46/116 (39.66%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 306 AHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 A + K+++ L K+ YQ + + + G++L+LDG++Q T +DE Y EMITH+PL + PNP+ VL++GGGDG +RE+ +H +VEK + EID+ K++ P++ L +P Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKYLPEISCELDNP 129
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK1 (Spermidine synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=speE PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.685e-21 Identity = 46/116 (39.66%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 306 AHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 A + K+++ L K+ YQ + + + G++L+LDG++Q T +DE Y EMITH+PL + PNP+ VL++GGGDG +RE+ +H +VEK + EID+ K++ P++ L +P Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKYLPEISCELDNP 129
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THENN (Spermidine synthase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=speE PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.004e-20 Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 315 LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 +K+ ++++ G+SD Q + +F++ G V LDG+ TE+DE Y EM+ H+P+ PNPK VL+IGGGDG LRE+ +H SVEK + E+D + + +++ DP Sbjct: 32 MKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDP 144
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THEMA (Spermidine synthase OS=Thermotoga maritima GN=speE PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.004e-20 Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 315 LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 +K+ ++++ G+SD Q + +F++ G V LDG+ TE+DE Y EM+ H+P+ PNPK VL+IGGGDG LRE+ +H SVEK + E+D + + +++ DP Sbjct: 32 MKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDP 144
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PSESM (Spermidine synthase OS=Pseudomonas syringae pv. tomato GN=speE PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.004e-20 Identity = 46/113 (40.71%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 291 MWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPD 629 ++ G ++EK+L + ++++Q++++FQ+ G+V+ LDGVIQ TE DE Y EM+TH+P+ + K VL+IGGGDG +LRE+++H +VE + EID ++ K+F P+ Sbjct: 8 LYEGYGQRFRMEKMLHEVRTEHQHLVIFQNPRMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAAKRVLIIGGGDGGMLREVAKHLTVEHITMVEIDATVVEMCKEFLPN 120
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THEP1 (Spermidine synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=speE PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.311e-20 Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 315 LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 +K+ ++++ G+SD Q + +F++ G V LDG+ TE+DE Y EM+ H+P+ PNPK VL+IGGGDG LRE+ +H SVEK + E+D + + +++ DP Sbjct: 32 MKINRMIYSGQSDIQRIDIFENPDLGVVFSLDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAVLCEVDGLVIEAARKYLKQTSCGFDDP 144
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_HAMD5 (Spermidine synthase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=speE PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.311e-20 Identity = 47/127 (37.01%), Postives = 83/127 (65.35%), Query Frame = 3 Query: 291 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 +W + HS ++++L++ K+D+Q++++F + +G+V+ L+ V+Q TERDE Y EM+TH+PL + + K VL+IGGGDG +LRE+ RH+ V++ + EID+ + +++FP D P Sbjct: 6 LWYEKLHSSFGQYFSIKEVLYRDKTDHQDLIIFDTEEFGRVMALNHVVQTTERDEFIYHEMMTHVPLLAHGDAKKVLIIGGGDGGILREVCRHAGVKEIIMVEIDQDVVNLCQEYFPHHHAGAYDDP 132 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |