DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE1_THETN (Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis GN=speE1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.825e-24 Identity = 52/114 (45.61%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 S+KV++ L K+ YQ++ + S +G+VL+LDG++Q TE+DE Y EMI H+PL + NPK+VL+IGGGDG +RE+ +HSSVE+ + EID+ + K++ P + L DP Sbjct: 16 SIKVKETLVVEKTPYQHLAILDSYQFGRVLVLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKDVLIIGGGDGGSVREVLKHSSVERVVLAEIDEAVIRNSKKYLPTISSALDDP 129 HSP 2 Score: 21.1718 bits (43), Expect = 1.825e-24 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 652 PRVTLHIGDGFAFV 693 PRV + IGDG +V Sbjct: 129 PRVEIMIGDGIKYV 142
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ALKMQ (Spermidine synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=speE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.232e-24 Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 S KV++ LF +S++Q V V + +GK++ LDG++ +TE+DE Y +MI H+P+ PN KNVL+IGGGDG RE+ R+ S++ D+ EIDKM V + +FP + L++P Sbjct: 16 SFKVKEHLFSEQSEFQKVDVLDTYEFGKLMTLDGLVMVTEKDEFIYHDMIVHVPMAVNPNIKNVLIIGGGDGGTARELMRYQSIKHVDMVEIDKMVCDVARDYFPTISSELENP 129 HSP 2 Score: 23.483 bits (49), Expect = 5.232e-24 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 652 PRVTLHIGDGFAFVK 696 PRV+L+ DG AF+K Sbjct: 129 PRVSLYYEDGVAFIK 143
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BACHD (Spermidine synthase OS=Bacillus halodurans GN=speE PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.426e-24 Identity = 50/115 (43.48%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 318 KVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGD 662 K+++ L K+D+Q + V ++ +G +L+LDG++ TE+DE Y EM+ H+PL + PNPK+VLV+GGGDG V+RE+ +H SVEK + EID + K++ P + L DP D Sbjct: 18 KIKRTLHTEKTDFQQLDVIETEEFGNMLVLDGMVMTTEKDEFVYHEMVAHVPLFTHPNPKHVLVVGGGDGGVIREVLKHPSVEKATLVEIDGKVIEYSKKYLPSIATALNDPRVD 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBP (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=speE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24 Identity = 51/128 (39.84%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 W++E + G A S +V K + +S +Q + +F++ ++G++ LDGV +T +DE +Y EMI H+P+ S PNP++VLVIGGGDG +RE+ +H SV++ + EIDK + ++FP+ +KDP Sbjct: 4 WYTEKLELEKGRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCEIDKAVVDISYKYFPECADAMKDP 131
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBA (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=speE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24 Identity = 51/128 (39.84%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 W++E + G A S +V K + +S +Q + +F++ ++G++ LDGV +T +DE +Y EMI H+P+ S PNP++VLVIGGGDG +RE+ +H SV++ + EIDK + ++FP+ +KDP Sbjct: 4 WYTEKLELEKGRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCEIDKAVVDISYKYFPECADAMKDP 131
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP3 (Spermidine synthase OS=Klebsiella pneumoniae (strain 342) GN=speE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 285 SPMWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 +P+W H V+ +L+ K+D+Q++++F + +G+V+ LDGV+Q TERDE Y EM+TH+PL + N K+VL+IGGGDG +LRE+SRH S+E + EID +Q+ P+ D P Sbjct: 4 NPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQYLPNHSAGAYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_EUBR3 (Spermidine synthase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=speE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.698e-24 Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 291 MWPGEAHSL------KVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 MW + H++ ++++ LF G+SDYQ + VF+S +GK++ LDG I ++ DE Y EM+TH+P+ PN K +L+IGGGDG V +E+ ++ SVE D+ E DKM V ++FFP+V L+D Sbjct: 3 MWFSQYHTVNVKLDVRIQEQLFSGQSDYQKIDVFKSYEFGKMVALDGEIVFSDTDEFIYDEMVTHVPMAVHPNAKRILIIGGGDGGVAKELIKYPSVEHIDVVETDKMFVDVCRRFFPEVACGLED 128
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP7 (Spermidine synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=speE PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.267e-23 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 285 SPMWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 +P+W H V+ +L+ K+D+Q++++F + +G+V+ LDGV+Q TERDE Y EM+TH+PL + N K+VL+IGGGDG +LRE+SRH S+E + EID +Q+ P+ D P Sbjct: 4 NPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQYLPNHNAGAYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CLOD6 (Spermidine synthase OS=Clostridium difficile (strain 630) GN=speE PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.654e-23 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQF 620 S+KV K LF+GKS +Q + VF S +GK L +DG++ +T +DE Y EMITH+P+ + N K VLVIGGGDG +RE+SR+ +EK D+ EIDKM V K++ Sbjct: 16 SIKVNKHLFEGKSQFQRIDVFDSDEFGKFLTIDGLMMVTYKDEFIYHEMITHVPMATNLNIKKVLVIGGGDGGTVRELSRYPQIEKIDMVEIDKMVVDVSKEY 118
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_EUBE2 (Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=speE PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.822e-23 Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 WFSE+ P ++VEK LF G+SDYQ + VFQS +GK L L+G + +E+D Y EM+ H+P+ P+ KNVL+IGGGDG V +E+ ++ ++E DI E D M V +++FP+ L+D Sbjct: 4 WFSELHS--PHVKFDIRVEKQLFSGESDYQRIDVFQSPEFGKFLTLNGSVIFSEQDCFIYNEMVVHVPMSVHPDVKNVLIIGGGDGGVSKELLQYDNIENIDIVEQDNMFVDVCREYFPETASGLED 128 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |