DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ERWCT (Spermidine synthase OS=Erwinia carotovora subsp. atroseptica GN=speE PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.685e-23 Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+++L+ K+D+Q++++F++ G+V+ LDGV+Q TERDE Y EM+TH+PL S N K VL+IGGGDG +LRE+SRH VE+ + EID + +Q+ P+ D P Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEQITMVEIDAGVVEFCRQYLPNHSAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ANATD (Spermidine synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=speE PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.685e-23 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 WF+E P + K+ K ++ K+ YQ++ + ++ +G++L+LDG +Q T DE Y E+I+H+PL + PNPK V VIGGGDG V+REI +H VEK + EID+ + K++ P++ L D Sbjct: 7 WFTE--QQTPDLGFTCKITKTIYTAKTQYQDLAILETKQFGRMLVLDGAVQTTIADEFCYHELISHVPLFTHPNPKKVAVIGGGDGGVIREILKHDEVEKAYLIEIDREVIEASKKYLPEISCALDD 131
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PECCP (Spermidine synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=speE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.286e-23 Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+++L+ K+D+Q++++F++ G+V+ LDGV+Q TERDE Y EM+TH+PL S N K VL+IGGGDG +LRE+SRH VE + EID + +Q+ P+ D P Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEHITMVEIDAGVVEFCRQYLPNHSAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_METJA (Probable spermidine synthase OS=Methanocaldococcus jannaschii GN=speE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.286e-23 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFP 626 WF+E A S++V+ IL++ KS +Q + + + +GK LILD Q TERDE Y E+I+H+PL + PNP+NVLVIGGGDG +RE+ +H SVE D E+D+ + K++ P Sbjct: 12 WFTEYHNN--NVALSVRVKDILYREKSGFQEIEIIDTYDFGKALILDNTFQTTERDEFIYHELISHIPLFTHPNPRNVLVIGGGDGGTVREVVKHKSVETVDFVELDEKVIEACKKYMP 128
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CALS8 (Spermidine synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.286e-23 Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 WF+E P + K+ K ++ K+ YQ++ + ++ +GK+L+LDG +Q T DE Y E+I H+PL + PNPK V VIGGGDG V+REI +H VEK + EID+ + K++ P++ L D Sbjct: 7 WFTE--QQTPDLGFTCKITKTIYTAKTKYQDLAILETKQFGKMLVLDGAVQTTIVDEFCYHELIAHVPLFTHPNPKKVAVIGGGDGGVIREILKHEEVEKAYLIEIDQEVIEASKKYLPEISCALDD 131
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BUCAP (Spermidine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=speE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 6.286e-23 Identity = 49/102 (48.04%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFP 626 ++KIL+Q K+ Y ++++FQ+S G+++ +DGV+Q TE+DE Y EM+TH+P+ KNVL++GGGDG +LREI RH S+E + EID + KQFFP Sbjct: 21 IDKILYQKKNKYHDIIIFQNSIMGRIMAIDGVVQTTEKDEFIYHEMLTHVPIFYHGLIKNVLIVGGGDGGILREICRHKSIENITMVEIDLNIIDLCKQFFP 122
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THEPX (Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.288e-23 Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 SLKV++ L K+ YQ++ + + +G+VL LDG++Q TE+DE Y EMI H+PL + NPK+VL++GGGDG +RE+ +H SVE+ + EID+ + K++ P + L DP Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDP 129 HSP 2 Score: 21.1718 bits (43), Expect = 7.288e-23 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 652 PRVTLHIGDGFAFV 693 PRV + IGDG +V Sbjct: 129 PRVEIMIGDGIKYV 142
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THEP3 (Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=speE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.288e-23 Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 SLKV++ L K+ YQ++ + + +G+VL LDG++Q TE+DE Y EMI H+PL + NPK+VL++GGGDG +RE+ +H SVE+ + EID+ + K++ P + L DP Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDP 129 HSP 2 Score: 21.1718 bits (43), Expect = 7.288e-23 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 652 PRVTLHIGDGFAFV 693 PRV + IGDG +V Sbjct: 129 PRVEIMIGDGIKYV 142
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_STRR6 (Spermidine synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=speE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.072e-22 Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WFSE+ P SL+ K L+ GKS++Q++ V + +GK+LIL+G + ++ D+ Y EM H+P+ PNPK VLVIGGGDG V + ++ + +E+ DI E D+M +V +++FPD L DP Sbjct: 4 WFSEVHT--PDVKLSLRTAKQLYAGKSEWQDIEVLDTPAFGKILILNGHVLFSDADDFVYNEMTVHVPMAVHPNPKKVLVIGGGDGGVAQVLTLYPELEQIDIVEPDEMLVEVCREYFPDFAAGLDDP 129
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_STRPN (Spermidine synthase OS=Streptococcus pneumoniae GN=speE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.072e-22 Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WFSE+ P SL+ K L+ GKS++Q++ V + +GK+LIL+G + ++ D+ Y EM H+P+ PNPK VLVIGGGDG V + ++ + +E+ DI E D+M +V +++FPD L DP Sbjct: 4 WFSEVHT--PDVKLSLRTAKQLYAGKSEWQDIEVLDTPAFGKILILNGHVLFSDADDFVYNEMTVHVPMAVHPNPKKVLVIGGGDGGVAQVLTLYPELEQIDIVEPDEMLVEVCREYFPDFAAGLDDP 129 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |