DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_MOOTA (Spermidine synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=speE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.072e-22 Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 WFSE+ P A S+++ + L K+ YQ + V + YG++L+LD +IQ T +DE Y EMI H+PL + PNP+ LVIGGGDG V+REI +H S+EK + EID +++ P++ L D Sbjct: 5 WFSELQT--PDLAISVRLNQTLHHEKTPYQELAVVDTEAYGRMLLLDNIIQTTVKDEFFYHEMIAHVPLNTHPNPRTALVIGGGDGGVVREIVKHPSIEKVTLVEIDARVVANAREYLPEIACGLDD 129
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ENT38 (Spermidine synthase OS=Enterobacter sp. (strain 638) GN=speE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.072e-22 Identity = 49/112 (43.75%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE+SRH S+E + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVSRHKSIETITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ERWT9 (Spermidine synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=speE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.400e-22 Identity = 50/118 (42.37%), Postives = 80/118 (67.80%), Query Frame = 3 Query: 291 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPD 629 MW H+ V+KI+++ K+D+Q++++F+++ G+V+ LDGV+Q TERDE Y EM+TH+PL + PK VL+IGGGDG +LRE+ RH ++E+ + EID +Q+ P+ Sbjct: 6 MWYETLHTGFGQYFSVDKIIYREKTDHQDLVIFENAALGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGAPKRVLIIGGGDGAMLREVCRHKNIEQITMVEIDAGVVTFCRQYLPN 123
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BACSU (Spermidine synthase OS=Bacillus subtilis GN=speE PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.400e-22 Identity = 48/117 (41.03%), Postives = 79/117 (67.52%), Query Frame = 3 Query: 312 SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGD 662 ++KV K L ++++Q++ + ++ +G +L LDG++ +E+DE Y EM+ H+PL + PNP++VLV+GGGDG V+REI +H SV+K + +ID + K+F P + G L DP D Sbjct: 17 TMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVD 133
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTH (Spermidine synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=speE PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.829e-22 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 WF+E P + K +K L K++YQ + V ++ +G++L+LDG+IQ T DE Y EMI H+PL + NPK LV+GGGDG +REI +H S+EK + EID+ +V K++ P++ Sbjct: 4 WFTEYQT--PTLGITCKTKKTLHSEKTEYQELAVIETEQFGRMLLLDGIIQTTVADEFVYHEMIAHVPLFTHKNPKKALVVGGGDGGSIREIVKHPSIEKAVLCEIDRRVIEVSKEYLPEI 122
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_CLOB8 (Spermidine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=speE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.389e-22 Identity = 50/118 (42.37%), Postives = 79/118 (66.95%), Query Frame = 3 Query: 291 MWPGEAH------SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFP 626 +W E H S+KVEK + K+++Q + V ++ +G+ LDG++ +TE+DE Y +MI H+P+ + PN KNVLVIG GDG +RE++R+S+VEK D+ EIDK + +++FP Sbjct: 3 LWYTEQHTENVRFSIKVEKEIHTEKTEFQRIDVLEAKEFGRFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTIRELTRYSTVEKIDMVEIDKRVVDICREYFP 120
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_BACWK (Spermidine synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=speE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.389e-22 Identity = 50/127 (39.37%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKD 650 WF+E G + ++ + L ++++Q + + ++ +G +LILDG++ TE+DE Y EM+ H+PL + PNP+NVLV+GGGDG V+RE+ +H SV+K + EID + KQ+ P + G L D Sbjct: 4 WFTEKQTKHFGI--TARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDD 128
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_YERPP (Spermidine synthase OS=Yersinia pestis (strain Pestoides F) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 VE +LF+ K+++Q++++F++ G+V+ LDGV+Q TERDE Y EM+TH+PL + K VL+IGGGDG +LRE+SRH ++E+ + EID + +Q+ P+ D P Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_YERPN (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 VE +LF+ K+++Q++++F++ G+V+ LDGV+Q TERDE Y EM+TH+PL + K VL+IGGGDG +LRE+SRH ++E+ + EID + +Q+ P+ D P Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_YERPG (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 VE +LF+ K+++Q++++F++ G+V+ LDGV+Q TERDE Y EM+TH+PL + K VL+IGGGDG +LRE+SRH ++E+ + EID + +Q+ P+ D P Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDP 132 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |