DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ESCF3 (Spermidine synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKDVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOUT (Spermidine synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOSM (Spermidine synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOSE (Spermidine synthase OS=Escherichia coli (strain SE11) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOLU (Spermidine synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOLI (Spermidine synthase OS=Escherichia coli (strain K12) GN=speE PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOLC (Spermidine synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOL6 (Spermidine synthase OS=Escherichia coli O6 GN=speE PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOL5 (Spermidine synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOK1 (Spermidine synthase OS=Escherichia coli O1:K1 / APEC GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |