DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOHS (Spermidine synthase OS=Escherichia coli O9:H4 (strain HS) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECODH (Spermidine synthase OS=Escherichia coli (strain K12 / DH10B) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECOBW (Spermidine synthase OS=Escherichia coli (strain K12 / BW2952) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO8A (Spermidine synthase OS=Escherichia coli O8 (strain IAI1) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO81 (Spermidine synthase OS=Escherichia coli O81 (strain ED1a) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO7I (Spermidine synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO5E (Spermidine synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO57 (Spermidine synthase OS=Escherichia coli O157:H7 GN=speE PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO55 (Spermidine synthase OS=Escherichia coli (strain 55989 / EAEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ECO45 (Spermidine synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.120e-22 Identity = 48/112 (42.86%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPP 656 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +LRE++RH +VE + EID +Q+ P+ D P Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDP 132 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |