DY258683

Overview
NameDY258683
Unique NameDY258683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1269
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258683 vs. ExPASy Swiss-Prot
Match: ATBH9_ARATH (Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana GN=ATHB-9 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.167e-29
Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 1
Query:  715 DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRGQENQRKKASRPQTVN*EINTYEINWLRKEND 981
            D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRR +E QRK+++R QTVN +++      L +END
Sbjct:   18 DSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMN-KLLMEEND 105          
BLAST of DY258683 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSJ (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica GN=HOX10 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.755e-28
Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 1
Query:  712 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRGQENQRKKASRPQTVN*EINTYEINWLRKENDSACQK 996
            +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRR ++ QRK++SR Q VN ++    +N L  E +   QK
Sbjct:   23 MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTA--MNKLLMEENERLQK 115          
BLAST of DY258683 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSI (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica GN=HOX10 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.755e-28
Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 1
Query:  712 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRGQENQRKKASRPQTVN*EINTYEINWLRKENDSACQK 996
            +D+GKYVRYT EQVEALERVY++CPKP+S RRQQL+RECPIL+NIEPKQIKVWFQNRR ++ QRK++SR Q VN ++    +N L  E +   QK
Sbjct:   23 MDSGKYVRYTPEQVEALERVYADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTA--MNKLLMEENERLQK 115          
BLAST of DY258683 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.082e-27
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query:  712 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRGQENQRKKASRPQTVN*EINTYEINWLRKEND 981
            +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRR +E QRK++SR Q +N ++       L +END
Sbjct:    8 MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESSRLQALNRKLTAMN-KLLMEEND 96          
BLAST of DY258683 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.082e-27
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query:  712 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRGQENQRKKASRPQTVN*EINTYEINWLRKEND 981
            +D  KYVRYT EQVEALER+Y ECPKPSSLRRQQL+RECP L+N++PKQIKVWFQNRR +E QRK++SR Q +N ++       L +END
Sbjct:    1 MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESSRLQALNRKLTAMN-KLLMEEND 89          
The following BLAST results are available for this feature:
BLAST of DY258683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ATBH9_ARATH1.167e-2973.03Homeobox-leucine zipper protein ATHB-9 OS=Arabidop... [more]
HOX10_ORYSJ3.755e-2865.26Homeobox-leucine zipper protein HOX10 OS=Oryza sat... [more]
HOX10_ORYSI3.755e-2865.26Homeobox-leucine zipper protein HOX10 OS=Oryza sat... [more]
HOX29_ORYSJ7.082e-2765.56Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
HOX29_ORYSI7.082e-2765.56Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AA11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258683 ID=DY258683; Name=DY258683; organism=Citrus clementina; type=EST; length=1269bp
GTTTTTTCATTTTCATTTTCTTTTACGATTCATTAATCAGCTTCTTTGCT
GTAATGTCACAGCCCAGTACTGCTCTCTTTCTTGTGAGAGAGCTTCAAGA
TCAAAATGGGTTCTGTGATTTTGAGCTCCTTCAGCTGAAAATCTAGGATT
TTTTTCTTTGTTCTTTCTTAAAGGGTTTGGTCTAATTGGAAGCAATAAAA
TTGGCAGGGAAAAAGAAAAAAAAAAACGAGTTCTTTAGTGTTCAGAGCTT
GATCAGCAACCAATAACCGCAAGGGTTTCATTAAAATACAGACTTTTTGT
TTGTTGTTGTTGATTATAAGCTCTCTTCAAGAACCCATCATCATTCATTT
GGCTTATTTGGCTTTGAGAGTCTTTACACTTAAGACCAAAGAATCTTCTT
TTAAGCATCACCAGTTTTGTAACTCTCTGTCTCTCTGTCTCTGTCTCTGT
CTCTCTCTCTCTCTCTTAACACATCACAAACGACGGACTTTACTAAGAAG
ACAAGGATATTTAAGCTCCCTAATCCCAAAACAAGCAGCACCTAGTTTGC
TTTTTTTCAAGACTCAATTTTAGCACACAGACAGACCCATCTGGTTAAAT
CTCTTGTGGGCTTGTCGTTGGATTTGCCAAAAAAAAGTAATGGCTATGGT
GATTCAGCAGCAGCAGCAGCAGCAAAGAGAGAGCAGTAGTGGGAGTATCA
ACAAGCACCAGCTTGATAATGGGAAGTATGTTCGTTACACGGCGGAGCAA
GTGGAAGCTCTCGAGAGAGTCTATTCTGAGTGCCCCAAGCCCAGTTCTTT
GCGTAGGCAACAGCTGATCCGTGAGTGCCCCATTCTTTCCAACATAGAGC
CTAAACAAATCAAAGTTTGGTTTCAAAATCGAAGGGGTCAAGAGAACCAG
AGGAAAAAGGCTTCAAGACCCCAAACGGTGAATTAGGAAATAAACACCTA
TGAAATAAACTGGTTGAGGAAGGAAAATGATTCGGCTTGCCAAAAAGGGT
GGCCCCAGTTTGGTGTTTTGAAAAATGGGTTATAAGAAAACCACAAATTT
GGGTAAAGCCCCCCGGCCGAATACCGGGATTGCAAACTTTGTGACCTTTT
GGGGGGGGCCCCACCCCCCTCAGCCAATTCTCTTGGAAAAAAAGAGCCCA
TTTACACCCTGGGCGGGGACACCTCTCTTTTTTCTTTGTTTGGAGGAAAA
AGAAAAAACCCTTTGGGCGCAAAAGAAATTTTTCTTCTTTTTCCAAAAAA
GAGAGATCAGCAACGAGGG
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