DY258684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 4.595e-24 Identity = 65/190 (34.21%), Postives = 104/190 (54.74%), Query Frame = 1 Query: 352 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNPCRLH-LSQQW 918 RVLD+ G+ +G + + ++ + M+ ++ DS + AQRQ + SFY+ ++GEEAI G A AL+ D P YR+ +L+ R +L + Q+ +N+ D KGRQ+PI Y ++ + TIS +ATQ QAVG A + ++ A A+ GDG T+ F + Y P L+ ++ QW Sbjct: 56 RVLDEQGDA-QGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQW 244
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.666e-23 Identity = 69/196 (35.20%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 310 RFIPESSEKRVPCFRVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 RF P + E R++ + GE + DF + E ++Y M+ +++D R G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV GDG TS G + I + G P Sbjct: 7 RFEPFTEEP----IRLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.132e-22 Identity = 66/190 (34.74%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 322 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 E ++ P F++L++ GE++ ++S E ++ MV +++D RQGR FY T G+EA I S AL +DFILP YR+ ++W G L Q F G Q+P + +N + I Q QA GVA LKM K A A+ YTGDGGTS G F I ++ P Sbjct: 15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLY----QAFLFSRGHFHGNQIP-----EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAP 195
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.132e-22 Identity = 65/182 (35.71%), Postives = 96/182 (52.75%), Query Frame = 1 Query: 352 RVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 R++ + GE + DF + E ++Y M+ +++D R G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV GDG TS G + I + G P Sbjct: 17 RLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAW (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MW2) GN=pdhA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.337e-22 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAS (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=pdhA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.337e-22 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAN (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain N315) GN=pdhA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.337e-22 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAM (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.337e-22 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAC (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain COL) GN=pdhA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.337e-22 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.135e-21 Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD++G ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL ++DFILP YR+ ++W G L F KG Q P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S G F I S+Y P Sbjct: 18 TQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAP 196 The following BLAST results are available for this feature:
BLAST of DY258684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258684 ID=DY258684; Name=DY258684; organism=Citrus clementina; type=EST; length=1094bpback to top |