DY258684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAEQ (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.135e-21 Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD++G ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL ++DFILP YR+ ++W G L F KG Q P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S G F I S+Y P Sbjct: 18 TQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_STAAR (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=pdhA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.135e-21 Identity = 60/188 (31.91%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 328 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q Q GVA++LK K+A A+ YTGDGG+S G F I ++Y P Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAP 196
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 8.111e-21 Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 322 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 ++ +K+ F++L++ GE++ + ++ + ++ MV +V+D RQGR FY T G+EA I + AL +DF+LP YR+ L+W G L Q F +G QMP +N ++ I Q Q GVA LK K A A+ YTGDGG S G F I +Y P Sbjct: 17 DAIKKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPLY----QAFLFSRGHFRGNQMP-----DDVNALSPQIIIGAQYIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAP 197
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_MYCGE (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma genitalium GN=pdhA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.188e-15 Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 349 FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRF 852 ++V D+ G+LI + ++ E Y M ++MD + QR G+ + +GEEA+ +G L+ +D++ P +R ++L+RG +Q N+ KG Q+ Y + +N ITI + Q A G+ Y L +K+ AV GDGGT+ G F Sbjct: 14 YQVYDNEGKLIDPNHKITLTDEQLKHAYYLMNLSRMMDKKMLVWQRAGKMLNFAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPEQLLLYWNGNE----KGSQIDAKYKTLPIN-ITIGA----QYSHAAGLGYMLHYKKQPNVAVTMIGDGGTAEGEF 172 HSP 2 Score: 28.1054 bits (61), Expect = 3.188e-15 Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNT 934 EG+F+ A+N A++ + VF NN +A +T Sbjct: 169 EGEFYEAMNIASIHKWNTVFCINNNQFAIST 199
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_MYCPN (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma pneumoniae GN=pdhA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.102e-13 Identity = 45/168 (26.79%), Postives = 79/168 (47.02%), Query Frame = 1 Query: 349 FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRF 852 ++V D+ G+L+ + +S E + M ++MD + QR G+ + +GEEA+ +G L+ +D+ P +R ++L+RG +Q ++ N ++G + K + I+ I Q A G+ Y L +K AV GDGGT+ G F Sbjct: 14 YQVYDNEGKLMDPNHKITLSNEQLKHAFYLMNLSRIMDKKMLVWQRAGKMLNFAPNLGEEALQVGMGMGLNENDWFCPTFRSGALMLYRGVKPEQLL--LYWNGNENGSKIE-------AKYKTLPINITIGAQYSHAAGLGYMLHYKKLPNVAVTMIGDGGTAEGEF 172 HSP 2 Score: 27.335 bits (59), Expect = 2.102e-13 Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNT 934 EG+F+ A+N A++ + VF NN +A +T Sbjct: 169 EGEFYEAMNIASIHKWNSVFCINNNQFAIST 199
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_ACHLA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.794e-13 Identity = 53/177 (29.94%), Postives = 81/177 (45.76%), Query Frame = 1 Query: 361 DDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGRFSCRIELCSSYGNP 891 D NG+++ ++ KE +KMY V + D + QRQGR Y +G+EA IG AAA+ D+ P YRE LL+RG L+ + N+ K + I + + I +Q A G+A + K+ K + GDGGT+ G F + +S+ P Sbjct: 1 DQNGKVVNEKMEPKLPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQIGMAAAMEPQDWNSPMYRELNTLLYRGDKLENVFLYWYGNERGSIKPEGVKI---------LPTNIIIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAP 168
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_ASCSU (Pyruvate dehydrogenase E1 component subunit alpha type I, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 6.262e-12 Identity = 44/164 (26.83%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 373 ELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGR 849 +L G D V+KE AV Y+ M+T++ M+S LY+ ++ F + G+EA +G+ AA+ A D + YR G G ++ + ++ + G+ +H YG N+ + + Q P G+A+++K K+ + GDG T+ G+ Sbjct: 41 KLDSGPDINVHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYS--GQEACAVGTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYGE---NFYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMFGDGATNQGQ 199 HSP 2 Score: 35.8094 bits (81), Expect = 6.262e-12 Identity = 14/52 (26.92%), Postives = 28/52 (53.85%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNTNISKTFPNEGYWLLGGRA*GI 997 +G ++N A + + PV+++C NNG+ T +++ + Y+ G GI Sbjct: 197 QGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAARSSASTDYYTRGDYVPGI 248
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_YEAST (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=PDA1 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 3.885e-11 Identity = 42/159 (26.42%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 400 QVSKEVAVKMYSHMVTLQVMD---SVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKA--DDGKGRQMPIH----YGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGR 849 + SK ++MY MV ++ M+ LY+A++ F ++G+EAI +G A++ D I+ YR G RG +++ ++ +A GKG M ++ YG + + Q+P G+A++ + + +DAC+ GDG ++ G+ Sbjct: 75 ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHL--SVGQEAIAVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGNGI--------VGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQ 223 HSP 2 Score: 29.261 bits (64), Expect = 3.885e-11 Identity = 14/46 (30.43%), Postives = 21/46 (45.65%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNTNISKTFPNEGYWLLG 979 +G + N A + PVVF C NN + T S++ Y+ G Sbjct: 221 QGQVFESFNMAKLWNLPVVFCCENNKYGMGTAASRSSAMTEYFKRG 266
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPT_ASCSU (Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 5.054e-11 Identity = 38/153 (24.84%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 403 VSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSGGR 849 V+KE A++ Y+ M T++ M++ LY+ ++ F + G+EA +G AA+ D + YR G G + + ++ + G+ +H YG N+ + + Q P G+A+++K +K+ + GDG T+ G+ Sbjct: 47 VTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYS--GQEACAVGMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYGE---NFYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQ 194 HSP 2 Score: 38.1206 bits (87), Expect = 5.054e-11 Identity = 13/46 (28.26%), Postives = 28/46 (60.87%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNTNISKTFPNEGYWLLG 979 +G + ++N A + E PV+++C NNG+ T+ +++ + Y+ G Sbjct: 192 QGQLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDYYTRG 237
BLAST of DY258684 vs. ExPASy Swiss-Prot
Match: ODPA_CAEEL (Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=3 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 8.511e-11 Identity = 41/153 (26.80%), Postives = 75/153 (49.02%), Query Frame = 1 Query: 403 VSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK-MEKKDACAVAYTGDGGTSGGR 849 +++E A+K Y M ++ M+S LY+ ++ F + G+EA +G AA++ D ++ YR G G T+ + ++ A + G+ +H +K N+ + + Q P GVA ++K E+K+ C Y GDG + G+ Sbjct: 50 LNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYS--GQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQPLGAGVALAMKYREQKNVCVTLY-GDGAANQGQ 197 HSP 2 Score: 36.5798 bits (83), Expect = 8.511e-11 Identity = 16/52 (30.77%), Postives = 26/52 (50.00%), Query Frame = 2 Query: 842 EGDFHAALNFAAVMETPVVFICRNNGWAHNTNISKTFPNEGYWLLGGRA*GI 997 +G A N A + + PV+F+C NNG+ T ++ + Y+ G GI Sbjct: 195 QGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGI 246 The following BLAST results are available for this feature:
BLAST of DY258684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258684 ID=DY258684; Name=DY258684; organism=Citrus clementina; type=EST; length=1094bpback to top |