DY258748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.609e-14 Identity = 57/169 (33.73%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATL---LAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ + + KV A A + + V ++ GL P TSFF I T I G +E ++ V LI D+VG+SEATL L I PFSYGL++ VY G +Y P + ++ GV + L + YPTL P I N K V+ +Y Sbjct: 92 KEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.472e-13 Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 145 ELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 +L E+ E + + APA + +D V + G+ P TSFF I T I G +E + V L+ K +VG SEATLL I PF+YG+ VL +Y +G ++ P + + S T ++LG +YPT+ + N K +V + A EY Sbjct: 92 DLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEY 255
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 6.186e-12 Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 181 KVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVR----AGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 +V APA + D +V + G+ P TSFF NI T I G VE ++ ++ DRV +S ATLL I PF Y + V V+ +G ++ R D +++ V G+S L+LG PT P +I + K ++GA+ A EY Sbjct: 113 RVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFL----REDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEY 264
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.932e-11 Identity = 50/163 (30.67%), Postives = 75/163 (46.01%), Query Frame = 1 Query: 148 LIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 L E+ V +V APA V D V + G+ P TSFF + T I G +E ++ V ++ ++VG SEA+LL I PF++GL V+ VY G ++ + VST ++L + YPTL + N K ++ A A Y Sbjct: 93 LTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASY 255 The following BLAST results are available for this feature:
BLAST of DY258748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258748 ID=DY258748; Name=DY258748; organism=Citrus clementina; type=EST; length=1228bpback to top |