DY258756

Overview
NameDY258756
Unique NameDY258756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_XANCP (Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas campestris pv. campestris GN=fbp PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23
Identity = 75/227 (33.04%), Postives = 108/227 (47.58%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIF-------GIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNGSFA 910
            +LT +L++++ +G ID EL  +++ +S ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G     ASEE D    V + Y SG+++++FDPLDGSSNID  VS G+IF       G   P DE                                         LQ G  ++              AA YC+Y  S + V+TLG+G+ A
Sbjct:    5 SLTRFLIEEQHAGRIDPELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDE---------------------------------------HFLQPGTQQV--------------AAGYCIYGPSTMLVLTLGHGTHA 178          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_XANCB (Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas campestris pv. campestris (strain B100) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23
Identity = 75/227 (33.04%), Postives = 108/227 (47.58%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIF-------GIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNGSFA 910
            +LT +L++++ +G ID EL  +++ +S ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G     ASEE D    V + Y SG+++++FDPLDGSSNID  VS G+IF       G   P DE                                         LQ G  ++              AA YC+Y  S + V+TLG+G+ A
Sbjct:    5 SLTRFLIEEQHAGRIDPELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDE---------------------------------------HFLQPGTQQV--------------AAGYCIYGPSTMLVLTLGHGTHA 178          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_XANC8 (Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23
Identity = 75/227 (33.04%), Postives = 108/227 (47.58%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIF-------GIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNGSFA 910
            +LT +L++++ +G ID EL  +++ +S ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G     ASEE D    V + Y SG+++++FDPLDGSSNID  VS G+IF       G   P DE                                         LQ G  ++              AA YC+Y  S + V+TLG+G+ A
Sbjct:    5 SLTRFLIEEQHAGRIDPELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDE---------------------------------------HFLQPGTQQV--------------AAGYCIYGPSTMLVLTLGHGTHA 178          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_PSEE4 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas entomophila (strain L48) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23
Identity = 68/217 (31.34%), Postives = 103/217 (47.47%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    ++ L+        +F+                                          QPG+  +AA Y +Y    + ++TLGNG
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNQYLSQNESLNEAAFL------------------------------------------QPGTEQVAAGYAIYGPQTMLILTLGNG 179          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPW (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain W619) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.087e-23
Identity = 72/217 (33.18%), Postives = 105/217 (48.39%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    +E L+                   +  NE                  N  L       QPG+  +AA Y +Y    + ++TLGNG
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLS-----------------QNETLNE------------------NAFL-------QPGTEQVAAGYAIYGPQTMLILTLGNG 179          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPG (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain GB-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 69/217 (31.80%), Postives = 102/217 (47.00%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    ++ L+                 N     E                             QPG+  +AA Y +Y    + ++TLGNG
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNQYLSQ----------------NESLNEEA--------------------------FLQPGTEQVAAGYAIYGPQTMLILTLGNG 179          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_PSEP1 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 69/217 (31.80%), Postives = 102/217 (47.00%), Query Frame = 2
Query:  254 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V + A+  + G  G  NVQGE QKKLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G+IF +    ++ L+                 N     E                             QPG+  +AA Y +Y    + ++TLGNG
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNQYLSQ----------------NESLNEEA--------------------------FLQPGTEQVAAGYAIYGPQTMLILTLGNG 179          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16PA_CHLP8 (Fructose-1,6-bisphosphatase class 1 OS=Chlorobaculum parvum (strain NCIB 8327) GN=fbp PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 67/214 (31.31%), Postives = 107/214 (50.00%), Query Frame = 2
Query:  260 TNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            +++L +Q+    I++E+T +L+ ++ A K +   V RA ++++ G+ G+ NVQGE+ KKLD+ +NE   N +   GR  I+ SEE +  +   +  SG Y+++FDPLDGSSNID  VS G+IF IY                                              L+  N     + +  Q G++ +AA Y +Y SSV+ V T G+G
Sbjct:    9 SHFLQQQKLYPEINSEVTGLLNDVAFAAKLVRREVVRAGLADILGLAGSTNVQGEEVKKLDLFANERLINAIGQHGRFAIMGSEENEETITPPKFESGEYVLLFDPLDGSSNIDVNVSVGTIFSIY---------------------------------------------RLKSDNPSQASIEDCLQKGADQVAAGYVIYGSSVMLVYTTGHG 177          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16A1_POLNA (Fructose-1,6-bisphosphatase class 1 1 OS=Polaromonas naphthalenivorans (strain CJ2) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 2
Query:  254 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            +LT +L++Q++  G I  EL +++  ++ ACK I+  V + A+ ++ G  G+ NVQGE QKKLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +   ++       DD  V                            D LQ GN +              +AA YC+Y      V+T+G+G
Sbjct:    6 SLTRYLVEQQRIDGHIPPELRLLIEVVARACKSISQAVNKGALGDVMGSAGSENVQGEIQKKLDIIANEVLIEANEWGGHLAAMASEEMDDIYVVPNRYPQGEYLLMFDPLDGSSNIDVNVSIGTIFSVLKKSE-------DDRGVE-------------------------ESDFLQAGNQQ--------------VAAGYCVYGPQTTLVLTVGDG 177          
BLAST of DY258756 vs. ExPASy Swiss-Prot
Match: F16A1_LEPCP (Fructose-1,6-bisphosphatase class 1 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 74/218 (33.94%), Postives = 104/218 (47.71%), Query Frame = 2
Query:  254 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAAISNLTGIQGAVNVQGEDQKKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECLADIGDDPTVSFMLLSFHCNTKQKNEV***ITSIFFNFDTLQLGNTELRCVVNVCQPGSNLLAASYCMYSSSVIFVITLGNG 901
            +LT +L++Q+ Q G I A+L +++  ++ ACK+IA  V + A+  + G  G+ NVQGE QKKLD++SNEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G+IF +       L  +G    VS                                         +  QPG    AA YC+Y      V+T+G+G
Sbjct:    6 SLTQFLVEQQRQHGRIPAQLRLLIEVVARACKRIAISVNKGALGEVLGSAGSENVQGEVQKKLDIISNEVLIEANEWGGHLAAMASEEMDSIHVVPNRYPQGEYMLLFDPLDGSSNIDVNVSIGTIFSV-------LRKVGHQHGVS---------------------------------------EEDFLQPGKFQAAAGYCVYGPQTTLVLTVGDG 177          
The following BLAST results are available for this feature:
BLAST of DY258756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
F16PA_XANCP3.895e-2333.04Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas... [more]
F16PA_XANCB3.895e-2333.04Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas... [more]
F16PA_XANC83.895e-2333.04Fructose-1,6-bisphosphatase class 1 OS=Xanthomonas... [more]
F16PA_PSEE43.895e-2331.34Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEPW5.087e-2333.18Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEPG6.644e-2331.80Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEP16.644e-2331.80Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_CHLP86.644e-2331.31Fructose-1,6-bisphosphatase class 1 OS=Chlorobacul... [more]
F16A1_POLNA6.644e-2333.03Fructose-1,6-bisphosphatase class 1 1 OS=Polaromon... [more]
F16A1_LEPCP6.644e-2333.94Fructose-1,6-bisphosphatase class 1 1 OS=Leptothri... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258756 ID=DY258756; Name=DY258756; organism=Citrus clementina; type=EST; length=912bp
CAGAAAGCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCAC
AGCTTCTCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAA
ATATGTGTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGT
TTTGAAGAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTG
TTGGGACAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATT
GAAACGCTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGA
TGCTGAGCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGA
TTGCTTCTTTGGTGCAAAGAGCTGCCATTTCCAACTTGACTGGAATTCAG
GGTGCTGTCAATGTTCAAGGCGAGGACCAGAAGAAGCTCGACGTCGTTTC
AAATGAGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTA
TAGCGTCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCT
GGAAACTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGA
TGCTGCAGTGTCTACTGGATCCATCTTTGGCATATACAGCCCAAATGATG
AGTGTCTTGCCGATATTGGTGATGATCCTACTGTGAGTTTCATGCTTCTG
TCATTTCATTGTAATACTAAACAGAAAAATGAAGTCTGATAGTAAATTAC
TTCCATTTTTTTCAATTTTGATACATTGCAGCTGGGCAACACTGAACTAA
GGTGTGTAGTGAACGTGTGCCAGCCCGGAAGCAACCTTCTTGCTGCAAGC
TATTGCATGTATTCAAGCTCTGTAATCTTTGTGATAACTTTAGGCAACGG
GTCCTTTGCATC
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