DY258758

Overview
NameDY258758
Unique NameDY258758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1152
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 3.066e-50
Identity = 103/234 (44.02%), Postives = 147/234 (62.82%), Query Frame = 1
Query:   91 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGG--AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L  ++    ++ +DW++ +RR+IHE PEL ++E+NTS L+   L KLG+     V   T +V +I  GS+P   VALRADMDALP++E  + E KSK+ G MHACGHD H  MLLG A LL + KD + G +R++FQPAEE G   GA  MI+ G +   + +FG+HI    P+G  A+  GP +A    F + V G+GGH + PH TIDPI  +  +  A+  + +R+ DP+Q
Sbjct:    3 LVEKLKNDVREIEDWIIQIRRKIHEYPELSYKEYNTSKLVAETLRKLGVEVEEGVGLPTAVVGKI-RGSKPGKTVALRADMDALPVEENTDLEFKSKVKGVMHACGHDTHVAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIIVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQ 235          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 1.925e-44
Identity = 102/235 (43.40%), Postives = 141/235 (60.00%), Query Frame = 1
Query:   88 ILTNQVMISAQQDK--DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            I T Q  I+ Q D   + +V +RR  H  PEL F+E  T+A I    + LG+P    V   G++A I GS   P VALRAD DALP+Q+  +  + SK+ G MHACGHD HT  LL  AK+LHQ + +L+GT  ++ Q AEE    GA  MI +G L +++ IFG H+    P G+I    G  +AA   F +KV G+GGH A PH T D +L  S ++ +LQ ++SR+ +P+QS
Sbjct:    3 ISTLQKEINKQLDGCFEEMVEIRRHFHMYPELSFQEEKTAAFIASYYESLGVPIRTNVGGRGVLANIEGSEPGPTVALRADFDALPIQDEKDVPYASKVPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQS 237          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.802e-42
Identity = 94/216 (43.52%), Postives = 128/216 (59.26%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI-GSGSRP-VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            LV +RR +H +PEL  +E+ T+A +   L   G+     + KTG+V Q+ G G  P ++A+R DMDALP++E+V     S+  G MHACGHD+HTT+ LG A +L Q   +L G VR LFQPAEE   GA  MI++GA+     I G+H+   IP   +    G   AA     + ++G  GH A PH  ID I  A+ VI ALQQ ISR  +PL+
Sbjct:   14 LVEIRRHLHAHPELSGQEYQTAAYVAGVLSSCGLHVEEAIGKTGVVGQLSGKGDDPRLLAIRTDMDALPIEEMVSLPFASRHPGVMHACGHDIHTTLGLGTAMVLSQMGHRLPGDVRFLFQPAEEIAQGASWMIQDGAMKGVSHILGVHVFPSIPAQQVGIRYGALTAAADDLEIFIQGESGHGARPHEAIDAIWIAAQVITALQQAISRTQNPLR 229          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.992e-41
Identity = 91/216 (42.13%), Postives = 127/216 (58.80%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQ-IGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            +++ RR +H +PEL F+E  T+  +   L   G        KT ++A+ IG     VVA+RADMDALP+QE   +E  SK  G MHACGHD HT MLLG AK+  Q +D + G +R LFQ AEE    GA  M++ G +   + + G H+   +  G I  + GP +AA   F +++ G+GGH AMPH TID I   + V+  LQ ++SR  DPL+
Sbjct:   17 VIAWRRHLHAHPELSFQEEKTAQFVYETLQSFGHLELSRPTKTSVMARLIGQQPGRVVAIRADMDALPIQEENTFEFASKNPGVMHACGHDGHTAMLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDPLE 232          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni GN=hipO PE=3 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 2.435e-39
Identity = 96/218 (44.04%), Postives = 128/218 (58.72%), Query Frame = 1
Query:  145 VRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASI---SGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +R QIHENPEL F+E  T+ L+ ++L + G      + KTG+V  +  G S   + LRADMDALPLQE     +KSK +  MHACGHD HTT LL AAK L        G + + FQPAEEG  GA  MI++G     DS+ +FG H    +P GS        G  +A++  ++++V GRGGH + P    DPI  AS +I+ALQ ++SR  DP  S
Sbjct:   17 IRHQIHENPELGFDELCTAKLVAQKLKEFGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACGHDGHTTSLLLAAKYL--ASQNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGWH---NMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQSIVSRNVDPQNS 229          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 8.660e-37
Identity = 85/221 (38.46%), Postives = 131/221 (59.28%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPL 774
            +++ L+++RRQ+H+ PE+  EE  T A +  E+DK+  PY      +TGI+  I G   +  +  RAD+D LP+QE V    +SK  G MHACGHD H T+ LG  K L Q++   +     LFQPAEE  AG   M ++ A G+   +  + +H++  +P G+I++  G   AAT   N+ ++G+GGHAA PH   D +L A+++I   Q ++SR  DP+
Sbjct:    5 EQEELIAIRRQLHQIPEIGLEEKETQAFLLNEIDKMKQPYLQVRTWQTGILVFIEGKNPQKTIGWRADIDGLPIQEEVVSAFQSKRPGFMHACGHDFHMTIGLGVLKELSQQQP--DNNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPV 223          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.529e-33
Identity = 83/220 (37.73%), Postives = 119/220 (54.09%), Query Frame = 1
Query:  112 SAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD 768
            S + D+  LV  RR +H +PEL FEE  T+ ++R  L  LG+        TG+   +G  +   +ALRAD+DALP+ E      +S++ G  HACGHD HTTML+GAA +L   K      VR++FQPAEE    GA   I  GAL     IF +H D  +  G +++ +GP  ++     V++   GGH A PH T D I   + ++  L  ++ R  D
Sbjct:  413 STELDEKKLVEWRRDLHAHPELSFEERRTTGVVRDHLVGLGLEPVLMPGGTGLWCDVGPETGECIALRADLDALPVAETTGLPFESRVPGVSHACGHDAHTTMLMGAASVL--TKYPPPTRVRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRID 630          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.608e-33
Identity = 87/219 (39.73%), Postives = 122/219 (55.71%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQIGSGSRPV--VALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H+ PEL F+E  T   I   ++ L   +      KTG++ ++  G  PV  +  RADMD LP+ E   +E  S  +G MHACGHD HTT+ LG   L     D+++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHQIPELGFQEWKTQQYILNYIETLPNEHIEVKTWKTGVIVKV-KGKNPVKTIGYRADMDGLPIVEETGYEFASTHEGMMHACGHDFHTTIGLGL--LTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRU0 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dapL PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.406e-33
Identity = 79/220 (35.91%), Postives = 123/220 (55.91%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+++RRQ+H+ PE+  EE+ T A +   +++L     +      KTGI+  + G      VA R+DMD LP+ E       SK  G+MHACGHD+H TM LG  + L +++ K    +  +FQPAEE  AG   M + GAL +   + ++ +H+   +P G++AS      A T    V  +G+GGHAA PH   D ++ AS  +  +Q ++SR  DP++
Sbjct:    4 LIAIRRQLHQIPEIGLEEYQTQAFLLSVIEQLCQDKPFIQIKTWKTGILVFLKGYAPEKTVAWRSDMDGLPITEETGLAFASKHQGRMHACGHDIHMTMALGLLEALVEKQSK--HNMLFIFQPAEENEAGGMLMYQSGALDEWMPDEVYALHVRPDLPVGTLASNRATLFAGTCEVKVSFKGKGGHAAFPHHANDALVAASYFVTQVQTIVSRNVDPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACHK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis subsp. konkukian GN=dapL PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.809e-33
Identity = 87/221 (39.37%), Postives = 124/221 (56.11%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGI----PYAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H+ PE+ FEE  T   I   LD +G          V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHKIPEIGFEEWKTQQYI---LDYIGTLLNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
The following BLAST results are available for this feature:
BLAST of DY258758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
CBPX1_SULSO3.066e-5044.02Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
YHAA_BACSU1.925e-4443.40Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]
Y100_SYNY31.802e-4243.52Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
AMAA_BACST1.992e-4142.13N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
HIPO_CAMJE2.435e-3944.04Hippurate hydrolase OS=Campylobacter jejuni GN=hip... [more]
DAPL_ENTFA8.660e-3738.46Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
CAAL4_RHOSR1.529e-3337.73Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_BACCN2.608e-3339.73Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_STRU03.406e-3335.91Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_BACHK5.809e-3339.37Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258758 ID=DY258758; Name=DY258758; organism=Citrus clementina; type=EST; length=1152bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGAATGTCTCAATCTCCT
TTTAATCATTTAATTCGAAAACCTGTGGAACTTTTGCCATTGAAAGCCAT
GAAGAATTCTCCATTTCCCCTTCTTAATAATTTTTACTGGGAATTTTAAC
TGGCTGAATGAATTGGCAAAAAAAAACTTGGAAGTGGAAATATTCATTGT
GGGAACTTAATAATTAATTTGGTCTTTGGGCTGAAAGGGGGTGGTCTGGT
TAATTTTTTGTTAAAAGGGGGGAAACCGCAATTTTAAATAAAATTTCCCC
CCGTTTTGGTTGAAATTTTGGGAGGCCCTTTTTGGGGGGGAGCCTTTAAA
AACGGGGAGGGGGTTTGTGATTCAAACCTCCCCAAAAAAAAGGGTGGAGA
AG
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