DY258758

Overview
NameDY258758
Unique NameDY258758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1152
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.294e-32
Identity = 84/218 (38.53%), Postives = 123/218 (56.42%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGRNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.690e-32
Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H  PE+ F+E  T   I   +  L + +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHRIPEIGFKEWETQQYILDYIGTLSLEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.883e-32
Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V VRR +H+ PE+ F+E  T   I   LD +G +P  Y      KTG++ ++ G     ++  RAD+D LP+ E   +E+ S  +G MHACGHD+H T+ LG   L     ++++  +  +FQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQVRRDLHKIPEIGFKEWKTQQYI---LDYIGTLPNEYLEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEYSSVHEGMMHACGHDLHATIGLGL--LTAAVSERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.423e-32
Identity = 82/218 (37.61%), Postives = 120/218 (55.05%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.423e-32
Identity = 82/218 (37.61%), Postives = 120/218 (55.05%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V +RR +H  PE+ F+E  T   I   +  L   +      KTG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI      G+IA+  G   A TS   + ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +PL S
Sbjct:    7 VQIRRDLHRIPEIGFKEWKTQQYILDYIGTLSHEFVEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 6.423e-32
Identity = 81/218 (37.16%), Postives = 119/218 (54.59%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V++RR +H+ PEL F+E  T   I   L  L          +TGI+ ++ G+     +  RADMD LP+ E  +   +S  +G+MHACGHD+H  + LG   L H     +   +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + + G+GGHAA PH T D ++ ASS+I+ LQ ++SR  +PL S
Sbjct:    3 VNIRRDLHQIPELGFQEFKTQQYILDYLATLPSERLQIKTWRTGILVRVHGTAPTKTIGYRADMDGLPIDEQTDVPFRSTHEGRMHACGHDMHMAIALGV--LTHVVHHPIRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQLQTIVSRNVNPLDS 218          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.096e-31
Identity = 84/223 (37.67%), Postives = 123/223 (55.16%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +++ L+S+RR +H+ PEL F+E  T A +   LD            +TG+  ++ G+    V A RADMD L + E   +  +S  +GKMHACGHD+H T+ LG     H   + ++  +  +FQPAEEG  GA  M+    L     + I  +HI    P G+IA+  G   A TS   + +EG+GGHAA PH   D ++ AS+++  LQ +ISR  DPL S
Sbjct:    3 NREQLISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRTGLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLHMTIALGVID--HFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDS 223          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.188e-31
Identity = 79/218 (36.24%), Postives = 115/218 (52.75%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR  H+ PEL F E  T  L+   +  +          KT +  ++       +A RADMD LP+ E   +   SK +G MHACGHD H T+ LG   L H    + E  +  +FQPAEEG  GA  +I+   LG    + I+ +HID  +P GSIA+  G   A TS   +  +G+GGHAA PH+  D ++  +  +  +Q +++R  DPL S
Sbjct:    6 LIHIRRAFHQIPELGFNEFKTQKLLLDTISNMEQTRLQIKTWKTAVFVRVEGRQDYTIAYRADMDGLPITEETGYSFASKHEGAMHACGHDFHMTIALGL--LDHFASHEPECHLLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDPLDS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.437e-31
Identity = 82/218 (37.61%), Postives = 123/218 (56.42%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK--TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIK--EGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPL 774
            L  +RR +H+ PEL F+E  T A +   ++++       + K  TGI+  + G      +  RAD+D LP+ E     + S  +G+MHACGHD+H T+ LGA + L Q  D +   V  +FQPAEEG  GA  M++  E      + +F +HI   +P G+++S +G   A TS   +  EG GGHAA PH T D  + AS+ ++ LQQ++SR  +PL
Sbjct:    5 LEQIRRDLHQIPELGFQEFKTQAYLLERINEIATENV-EIKKWSTGILVYVHGKSPARKIGFRADIDGLPILEQTNLPYASLHEGRMHACGHDLHMTIALGALEKLIQ--DPINDDVIFVFQPAEEGPGGAKPMLESEEFQQWKPDMMFALHIAPELPVGTVSSKAGLLFANTSELFIDFEGVGGHAAYPHLTKDMTVAASNFVVQLQQIVSRGLNPL 219          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.437e-31
Identity = 78/218 (35.78%), Postives = 121/218 (55.50%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            V++RR +H+ PEL F+E  T   + R +  L          KTGI  ++ G+  R ++  R D+D LP++E     + S+ +G MHACGHDVH ++ LG   L H  +  ++  +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ A S++  LQ +++R  DPL S
Sbjct:    8 VAIRRDLHKIPELGFQEFKTQQYLLRYIHALPQERLEIQTWKTGIFVKVKGTAPRKMIGYRTDIDGLPIKEETGLPYSSEHEGNMHACGHDVHMSIALGL--LTHFAEHPIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDS 223          
The following BLAST results are available for this feature:
BLAST of DY258758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_BACC11.294e-3238.53Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC21.690e-3237.61Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK2.883e-3238.46Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCR6.423e-3237.61Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC46.423e-3237.61Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_ANOFW6.423e-3237.16Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
DAPL_BACP21.096e-3137.67Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACSK3.188e-3136.24Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_OCEIH5.437e-3137.61Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_GEOSW5.437e-3135.78Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258758 ID=DY258758; Name=DY258758; organism=Citrus clementina; type=EST; length=1152bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGAATGTCTCAATCTCCT
TTTAATCATTTAATTCGAAAACCTGTGGAACTTTTGCCATTGAAAGCCAT
GAAGAATTCTCCATTTCCCCTTCTTAATAATTTTTACTGGGAATTTTAAC
TGGCTGAATGAATTGGCAAAAAAAAACTTGGAAGTGGAAATATTCATTGT
GGGAACTTAATAATTAATTTGGTCTTTGGGCTGAAAGGGGGTGGTCTGGT
TAATTTTTTGTTAAAAGGGGGGAAACCGCAATTTTAAATAAAATTTCCCC
CCGTTTTGGTTGAAATTTTGGGAGGCCCTTTTTGGGGGGGAGCCTTTAAA
AACGGGGAGGGGGTTTGTGATTCAAACCTCCCCAAAAAAAAGGGTGGAGA
AG
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