DY258758

Overview
NameDY258758
Unique NameDY258758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1152
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LACAC (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus acidophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.524e-30
Identity = 76/225 (33.78%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLG-------IPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDS---EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR +HE PEL  +E  T   + + +  L        +P   P A  G+V   G   +  +  R D+DALP+QE       SK  G MHACGHD+H T+ LG      + + K    +   FQPAEE  +G     ++G        +  +G+H +  +P GSI    G   A T+  N+ V G+ GHAA P +  D ++ A+++I+ +Q +ISR  DP+QS
Sbjct:    9 LIQIRRHLHEIPELALQEKETHDYLLKVIKNLKQDHLTIVVPKTLPTAILGLVK--GINPKKTIGYRTDIDALPVQEKTGLPFTSKHSGIMHACGHDIHMTVALGLLSYFSENQPK--DNLLFFFQPAEESESGGKQAYEKGLFQGKFKPDEFYGLHDNPELPAGSIGCRMGTLFAGTTEINIDVIGKSGHAAFPQNANDTVVAAANLIMQIQTIISRSIDPIQS 229          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRSV (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus sanguinis (strain SK36) GN=dapL PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.603e-30
Identity = 79/220 (35.91%), Postives = 121/220 (55.00%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQR-KDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            +++RR +H+ PE+  EE+ T A + + +D L  G+ +      +TGI+  I GS     +  R D+D LP+ E    +  S  +G+MHACGHD+H T+ LG   LL Q    +    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+  G   A T    +  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP++
Sbjct:    5 LNIRRDLHQIPEIGLEEYKTHAYLMQVIDGLTAGLDFVEIRTWRTGILVFIKGSSPDKTIGWRTDIDGLPIVEDTGLDFASTHEGRMHACGHDMHMTVALG---LLEQAVSTQPTHNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRGC (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.749e-29
Identity = 77/220 (35.00%), Postives = 117/220 (53.18%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEG-TVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            + +RR +H+ PE+  EE+ T A + + ++ L     +   +T   GI+  I GS     +  R D+D LP+ E    +  S  +G+MHACGHD+H T+ LG   LL Q         +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+  G   A T    +  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP++
Sbjct:    5 LKIRRDLHQIPEIGLEEYKTHAYLMQVIEGLTADLDFVEIRTWRTGILVFIKGSSPYKTIGWRTDIDGLPIVEETGLDFASTHEGRMHACGHDMHMTVALG---LLEQALSAQPNHNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALIAASYFITQVQTIVSRNVDPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_BREBN (Putative N-acetyldiaminopimelate deacetylase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.749e-29
Identity = 80/217 (36.87%), Postives = 117/217 (53.92%), Query Frame = 1
Query:  145 VRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +RR +H+ PE  F E  T   +   L KL          +TGI+ ++ +G++P  ++A R DMD LP+ E   +  +S  +G MHACGHD+H  + LG   L H  +  +   +  LFQPAEEG  GA+ M++     +   + IF +HI    P G IA+  G   A TS   + + G+GGHAA PH   D ++  S ++  LQ +ISR  DPL S
Sbjct:    9 IRRDLHQIPEPGFAEVKTQQYLLDYLKKLPQERIEIKTWRTGILVKL-AGTKPKRLIAWRTDMDGLPIVEETSYPFRSLHEGYMHACGHDMHMAIALGL--LTHFTEHSIADDLLFLFQPAEEGPGGAWPMMESEEFAEWRPDCIFALHIAPEYPVGQIATKPGILFANTSELYIDLVGKGGHAAFPHKANDMVVAGSHLVTQLQSIISRNIDPLDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.983e-29
Identity = 77/221 (34.84%), Postives = 121/221 (54.75%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYAYPVA-KTGIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+ +RR +H+ PE+  EE  T A +   + ++  G  +      +TGI+  +  GSRP   +  R D+DALP+ E       S+ +G+MHACGHD+H T+ LG    + Q + K    +  LFQPAEE  AG   M ++GA G+   +  +G+H+      G IA+ +    A T    +  +G+GGHAA PH+  D ++ AS  I  +Q ++SR  DP++
Sbjct:    5 LIKIRRDLHQIPEIGLEEFKTQAYLLERIAEITNGKDFVEQRTWRTGILVFL-KGSRPQKTIGWRTDIDALPVVEETGLAFASQHEGRMHACGHDMHMTIALGLLDTMVQVQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIE 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LISIV (Putative N-acetyldiaminopimelate deacetylase OS=Listeria ivanovii GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.983e-29
Identity = 80/226 (35.40%), Postives = 124/226 (54.87%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQIGSGSRPV--VALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            D +  +S+RR++H+ PE  ++E  T A +   ++KL  P  Y   K   TG++ ++ SG+ P   +  R D+DALP+ E      +SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S
Sbjct:    2 DLNQFISIRRELHQIPETGYKEWKTQAYLLDYINKL--PSRYLEVKKWRTGLLVRV-SGTSPTKTIGYRTDIDALPITEETGLAFESKHAGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDS 222          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.983e-29
Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR +H+ PE+  EE+ TS  + + ++  G+P      K   T I+  + G      +  R D+D LP++E       SK +G+MHACGHD+H T+ LG        + K   T   +FQPAEE  +G   + + G L +   + I+ +H +  +P G+I    G   A T   +VK  G+ GHAA PH   D ++  +  +  +Q ++SR  DP+QS
Sbjct:    8 LIKIRRDLHQIPEIGLEEYETSDYLLKIIN--GLPQENLEIKRWKTAILVHLNGENKNYTIGYRTDIDGLPVEEKTGLPFSSKHEGRMHACGHDIHMTVALGVLSYFASHRPKYNMT--FIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQS 224          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.089e-29
Identity = 73/220 (33.18%), Postives = 118/220 (53.64%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA---KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L++ RR +H+ PEL  EE  T A +   ++ L    ++      KTGI+  + GS     +  RAD+D LP+ E    + KS    +MHACGHD H T+ LG  + + +++ +    +  LFQPAEE  AG   M + GA GD   +  +G+H+   +  G +A+      A T    ++  G+GGHAA P++  D ++ AS  +  +Q ++SR  DP++
Sbjct:    4 LIATRRALHQIPELGMEEFKTHAFLMETIEGLLQDCSFAQVRTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTIALGLLEKMAEQQPR--NNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.089e-29
Identity = 73/220 (33.18%), Postives = 118/220 (53.64%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA---KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L++ RR +H+ PEL  EE  T A +   ++ L    ++      KTGI+  + GS     +  RAD+D LP+ E    + KS    +MHACGHD H T+ LG  + + +++ +    +  LFQPAEE  AG   M + GA GD   +  +G+H+   +  G +A+      A T    ++  G+GGHAA P++  D ++ AS  +  +Q ++SR  DP++
Sbjct:    4 LIATRRALHQIPELGMEEFKTHAFLMETIEGLLQDCSFAQVRTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTIALGLLEKMAEQQPR--NNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRP7 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain 70585) GN=dapL PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.646e-29
Identity = 74/221 (33.48%), Postives = 117/221 (52.94%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD      +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIE 221          
The following BLAST results are available for this feature:
BLAST of DY258758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_LACAC3.524e-3033.78Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRSV4.603e-3035.91Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRGC1.749e-2935.00Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_BREBN1.749e-2936.87Putative N-acetyldiaminopimelate deacetylase OS=Br... [more]
DAPL_STRMU2.983e-2934.84Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LISIV2.983e-2935.40Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LACS12.983e-2932.58Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRSY5.089e-2933.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS25.089e-2933.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP76.646e-2933.48Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258758 ID=DY258758; Name=DY258758; organism=Citrus clementina; type=EST; length=1152bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGAATGTCTCAATCTCCT
TTTAATCATTTAATTCGAAAACCTGTGGAACTTTTGCCATTGAAAGCCAT
GAAGAATTCTCCATTTCCCCTTCTTAATAATTTTTACTGGGAATTTTAAC
TGGCTGAATGAATTGGCAAAAAAAAACTTGGAAGTGGAAATATTCATTGT
GGGAACTTAATAATTAATTTGGTCTTTGGGCTGAAAGGGGGTGGTCTGGT
TAATTTTTTGTTAAAAGGGGGGAAACCGCAATTTTAAATAAAATTTCCCC
CCGTTTTGGTTGAAATTTTGGGAGGCCCTTTTTGGGGGGGAGCCTTTAAA
AACGGGGAGGGGGTTTGTGATTCAAACCTCCCCAAAAAAAAGGGTGGAGA
AG
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