DY258758

Overview
NameDY258758
Unique NameDY258758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1152
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.526e-28
Identity = 77/220 (35.00%), Postives = 118/220 (53.64%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +++RR++H+ PE  ++E  T A +   + KL  P  +   K   TGI+  + G+     +  R D+DALP+ E  E    SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKL--PSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.299e-28
Identity = 73/221 (33.03%), Postives = 117/221 (52.94%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++
Sbjct:    4 LIQTRRALHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.299e-28
Identity = 74/221 (33.48%), Postives = 118/221 (53.39%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RRQ+H+ PE+  EEH T   +   + ++    ++      +TG++  + GS  +  +  R D+D LP++EL      SK +G+MHACGHD+H T+ LG  + L + + K    +  LFQPAEE  AG   M   GA  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  +  +Q ++SR  DPL S
Sbjct:    4 LIEIRRQLHQIPEIGLEEHKTQKYLLTIIHQIIQNKSFIQVETWQTGLLVYLKGSQGQKTIGWRTDIDGLPVEELTNLPFASK-NGRMHACGHDIHMTVALGLLEKLSESQPK--NNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LACH4 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus helveticus (strain DPC 4571) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.299e-28
Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRR-------ELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDS---EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RR +HE PEL  +E  T   + +       E   + +P   P A   ++   GS  +  +  R D+DALP++E       S   G MHACGHD+H ++ LG      + + K    +   FQPAEE  +G     ++G        +  +G+H +  +P G+I    G   A T+  N+ + G+GGHAA P +  D ++ A+S+I+ +Q +ISR  DP+QS
Sbjct:    9 LIQIRRHLHEIPELALQEKETHDYLLKIIKGFNSEFLTIKVPEELPTAILVLIK--GSNPQRTIGYRTDIDALPVEEKTNLPFSSTHPGIMHACGHDIHMSVALGLLSYFSENQPK--DNLLFFFQPAEESESGGKKAYEDGIFEGKFRPDEFYGLHDNPELPAGAIGCREGTLFAGTTEVNIDLIGKGGHAAFPQNANDTVVAAASLIMQIQTVISRSIDPIQS 229          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.308e-28
Identity = 73/221 (33.03%), Postives = 117/221 (52.94%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHAC HD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P++
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACVHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIE 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.348e-28
Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPL 774
            ++ + +RR++H+ PE  F+E  T A I  ++        +Y   +TG+  ++ G      +  RAD+D LP++E       S+  G MHACGHDVH ++ LG  + + +    +   V  LFQPAEEG  GA  MIK           ++G+H+    P G+IAS  G   A+    ++ + G+ GHAA PH TID ++  +++I+ LQ ++SR  +P+
Sbjct:    2 EYAIEMRRELHKIPEPGFKEFKTQAFILDQIRSYPEDRVSYDTFETGVFVRVKGLTGNRTIGYRADIDGLPIEEATGLPFCSEHPGFMHACGHDVHASIALGLLRRIVELP--VMDDVVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVHITIYGQSGHAAFPHLTIDTVVAQAALIMQLQTIVSRSINPM 218          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 9.597e-28
Identity = 74/221 (33.48%), Postives = 119/221 (53.85%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            L+ +RRQ+H+ PE+  EE+ T   +   + +L     +   +T   GI+  + GS S+  +  R D+D LP++EL +  + SK +G+MHACGHD+H T+ LG  + + + + +    +  LFQPAEE  AG   M    A  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  I  +Q ++SR  DPL S
Sbjct:    4 LIEIRRQLHQIPEIGLEEYETQKYLLAIIQELTQNKPFIQVRTWQTGILVYLAGSQSQKTIGWRTDIDGLPIEELTDLPYASK-NGRMHACGHDIHMTVALGLLEKMSESQPR--DNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDPLAS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LISMH (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.253e-27
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGNNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LISMF (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.253e-27
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDS 221          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: DAPL_LISMC (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.253e-27
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP+ S
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDS 221          
The following BLAST results are available for this feature:
BLAST of DY258758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_LISMO2.526e-2835.00Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_STRPI3.299e-2833.03Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLM3.299e-2833.48Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACH43.299e-2832.00Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRPN4.308e-2833.03Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_EXIS27.348e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=Ex... [more]
DAPL_LACLA9.597e-2833.48Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LISMH1.253e-2733.94Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMF1.253e-2733.94Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMC1.253e-2733.94Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258758 ID=DY258758; Name=DY258758; organism=Citrus clementina; type=EST; length=1152bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGAATGTCTCAATCTCCT
TTTAATCATTTAATTCGAAAACCTGTGGAACTTTTGCCATTGAAAGCCAT
GAAGAATTCTCCATTTCCCCTTCTTAATAATTTTTACTGGGAATTTTAAC
TGGCTGAATGAATTGGCAAAAAAAAACTTGGAAGTGGAAATATTCATTGT
GGGAACTTAATAATTAATTTGGTCTTTGGGCTGAAAGGGGGTGGTCTGGT
TAATTTTTTGTTAAAAGGGGGGAAACCGCAATTTTAAATAAAATTTCCCC
CCGTTTTGGTTGAAATTTTGGGAGGCCCTTTTTGGGGGGGAGCCTTTAAA
AACGGGGAGGGGGTTTGTGATTCAAACCTCCCCAAAAAAAAGGGTGGAGA
AG
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