DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.698e-11
Identity = 65/235 (27.66%), Postives = 107/235 (45.53%), Query Frame = 3 
Query:    6 AEYVKHNLFSNLIRHPKFISDTKSAIAD----AYSHTDSEFLK------SENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR----GGNAIA--VSRDHKPDQTDERQRIE-----DAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ---------------------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEA-AKRLMQEAYQRGS 581
            A ++  ++F +L R   F ++ K    D    A+  T+  FL       S   Q    GS     ++    L VAN+GDSRAV+ R     G  +A  +S +H     + RQ ++     D    V+    WRV G++ +SR+ GD  LK+                      + ++P I    I  +  F+I ASDGLW+ ++N+EAV +++   +P    A+RL++ A Q  +
Sbjct:   95 ARFINDHMFHHLRR---FATEHKCMSTDVIRKAFQATEEGFLSLVSKQWSLKPQIAAVGSCCLVGVICSGTLYVANLGDSRAVLGRFVKSTGEVVATQLSSEHNACYEEVRQELQASHPDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLHSKFRLRETFKRPILSSEPAIAVHQIQPNDHFVIFASDGLWEHLSNQEAVDLVQ--NNPRNGIARRLVKVAMQEAA 324
[Close]
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: CYAA_YEAST (Adenylate cyclase OS=Saccharomyces cerevisiae GN=CYR1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 8.748e-11
Identity = 45/161 (27.95%), Postives = 82/161 (50.93%), Query Frame = 3 
Query:  147 AGSTASTAILVGDRLLVANVGDSRAVICRG-GNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP-IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLAN 623
            +G+ ++   + G +L  AN+GD  A++ +  G+   +++ H P + +E +RI  +GG+V      ++ GV+ VSRA G   L  ++ A P+I    +  + E LI+A+  LW+ +  +    + +    DP  AA  L   A   G  +NIT + +    N
Sbjct: 1470 SGACSTVIYIRGKKLFAANLGDCMAILSKNNGDYQTLTKQHLPTKREEYERIRISGGYV---NNGKLDGVVDVSRAVGFFDLLPHIHASPDISVVTLTKADEMLIVATHKLWEYMDVDTVCDIARENSTDPLRAAAELKDHAMAYGCTENITILCLALYEN 1627
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
P2C28_ORYSJ6.698e-1127.66Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
CYAA_YEAST8.748e-1127.95Adenylate cyclase OS=Saccharomyces cerevisiae GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
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