DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.528e-34
Identity = 81/207 (39.13%), Postives = 117/207 (56.52%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            AA Y   +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  277 AAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.528e-34
Identity = 81/207 (39.13%), Postives = 117/207 (56.52%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            AA Y   +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  277 AAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.301e-34
Identity = 80/207 (38.65%), Postives = 117/207 (56.52%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            AA Y   +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG ++W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DNIT +VV
Sbjct:  291 AAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 497          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.301e-34
Identity = 87/195 (44.62%), Postives = 123/195 (63.08%), Query Frame = 3
Query:   51 PKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA--GTWRVGGVLAVSRAFGDRLLKQYVVADPEI-QEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV---RFL 617
            P       +AI  AY  TDSEFL    +Q    G+ A+TA+++   L VAN+GD RAVI R G A A++ DH P + DER RIE +GG+V     G WRV   LAV+R+FGD  LK++VVA+PE+ +  +  +  EFL++ASDGLW+ V+N+EAV  +       ++ +RL+  A +RGS D++T +VV   RFL
Sbjct:  205 PAAADHVAAAIRAAYLATDSEFL----SQGTRGGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQEAVDAVAAGHYSVDSCRRLVDMARRRGSRDDVTVMVVDLKRFL 395          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 8.131e-33
Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 3
Query:   78 AIADAYSHTDSEFLKSENNQNRDA----------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW-AGTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            A++ A+  TD  F + E + +R +          G TA  ++LV ++L VANVGDSRA++CR G+  A+S+ H     DER R+   GG + W   TWRV    L V+R+ GD  LK  V A+PEI E ++ +  EFL++ASDGLWDV+ +EE + +I+  +++P   +KRL  EA  RGS DNIT +VV
Sbjct:  458 ALSQAFVRTDLAF-RQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKPAVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVIGIIRDTVKEPSMCSKRLATEAAARGSGDNITVIVV 646          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.387e-32
Identity = 79/196 (40.31%), Postives = 120/196 (61.22%), Query Frame = 3
Query:    3 AAEYVKHNLFS---NLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRG 578
            AAE+V  NL      ++ + K   +   A   A+  TD +FL+    +   +G+   TA++    ++V+N+GD RAV+CR G A A++ DHKP + DE++RIE  GG+V    G WRV G+LAVSR+ GD  LK++VVA+PE +   ++  +EFL+LASDGLWDVV+N+EAV  +  +    +  K   +E   +G
Sbjct:  163 AAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDRDFLE----KGVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTVLHVLAQRKTPKESEEENLVQG 354          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.366e-32
Identity = 85/214 (39.72%), Postives = 130/214 (60.75%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            AA + K N+   ++    F + TK A   A+  TD   L   ++ +R +G+TA TA+++   +L+AN GDSRAV+ + G AI +S+DHKP+ T ER RIE  GG V++ G   + G L+V+RA GD  +K        +  +PE++E V+    E+LI+  DGLWDV++++ AV M++       DPE  ++ L++EA QR S DN+T VVV F
Sbjct:  118 AASFTKKNIMKLVMEDKHFPTSTKKATRSAFVKTDHA-LADASSLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGG-VIYDG--YLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNSCDNLTVVVVCF 327          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 6.883e-32
Identity = 73/207 (35.27%), Postives = 117/207 (56.52%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE-----AAKRLMQEAYQRGSADNITCVVV 608
            AA Y   ++ +N  R P+  +D + A+ +A+  TD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   H+P++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV ++E V +++     ++      A+ L+  A +RGS DNIT +VV
Sbjct:  205 AARYAAVHVHTNAARQPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLRVAEELVAAARERGSHDNITVMVV 411          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.883e-32
Identity = 86/196 (43.88%), Postives = 118/196 (60.20%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSE--NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------PIQDPE--------EAAKRLMQEAYQRGSADNITCVVV 608
            K A+A  ++  D E   +E  +   +  GSTA  A++   R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +R+ GVLA SR+ GD  LK YV+A+PE+         EFLILASDGLWDVV+N+ A  + +         + PE        +AA  L++ A  RGS DNI+ VVV
Sbjct:  191 KEAMAACFTRVDGEVGGAEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGRAASKYPESVSGSTAADAAALLVELAISRGSKDNISVVVV 386          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.616e-31
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK--------------PIQDPEE---------AAKRLMQEAYQRGSADNITCVVV 608
            ++SE     + GSTA  A++    ++VAN GDSR V+CRG   +A+S DHKPD+ DER RIE  GG V+    +RV G+LA+SR+ GDR LK +V+  PE+         + LILASDGLWDVV+NEEA  + +              P+ D  E         AA  LM+ A ++GS DNIT +VV
Sbjct:  189 VRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVARRQILLWHKNNGAASPLSDEGEGSTDPAAQAAADYLMRLALKKGSEDNITVIVV 375          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
PPM1E_RAT2.528e-3439.13Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE2.528e-3439.13Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN3.301e-3438.65Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C74_ORYSJ3.301e-3444.62Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
P2C31_ARATH8.131e-3342.63Protein kinase and PP2C-like domain-containing pro... [more]
P2C14_ARATH1.387e-3240.31Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C47_ARATH2.366e-3239.72Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
PPM1F_HUMAN6.883e-3235.27Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C08_ORYSJ6.883e-3243.88Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C50_ORYSJ2.616e-3143.32Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
back to top