DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.827e-31
Identity = 83/199 (41.71%), Postives = 116/199 (58.29%), Query Frame = 3
Query:   54 KFISDTK--SAIADAYSHTDSEFL---------KSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            +F S+T    A+ +A+  TD  F          K    +N   G TA TA++V ++L VAN GD RA++ R G    ++RDH      ER+RI   G  V W   TWRVG   L V+R+ GD  LK  V A PE+ E ++    EFL++ASDGLWDV++NE+ +++IK  +++P   +KRL  EA  RGS DNIT +VV
Sbjct:  447 QFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVV 645          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.610e-31
Identity = 83/230 (36.09%), Postives = 130/230 (56.52%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKF----------ISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGG 632
            AA YV+ N         +F          + + ++++ +A+   D   L  + + +   G+TA TA++ G  L+VAN GD RAV+CR G AI +S DHKP    ER+R+E++GGF+   G   +  VLAV+RA GD  LK        ++++PEI++  +    EFL++  DG+WDV+T++EAV++++       DP   A+ L+ EA  R S DN+T VVV F+    G
Sbjct:  129 AAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLA-LAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDG--YLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEALGRNSFDNLTAVVVCFMTMDRG 355          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.695e-30
Identity = 78/227 (34.36%), Postives = 120/227 (52.86%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLAN-----QGGSSFPGSA 653
            AA Y   ++ +N    P+ ++D  +A+ +A+ HTD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKP++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +    ++L+LA DG +DVV + E   ++     +        A+ L+  A  RGS DNIT +VV FL +     +GG    G A
Sbjct:  201 AARYASVHVHTNASHQPELLTDPAAALKEAFRHTDQMFLQKAKRERLQSGTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGLEDYLLLACDGFFDVVPHHEIPGLVHGHLLRQKGSGMHVAEELVAVARDRGSHDNITVMVV-FLRDPLELLEGGGQGAGGA 426          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.695e-30
Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKS-----------ENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD-------PE--------EAAKRLMQEAYQRGSADNITCVVV 608
            K A+  +++  D E + S           E +  R  GSTA  A++   R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +RV GVLA SR+ GD  LK +V A+PE++        EFLILASDGLWDVV+NE A  + +   +       PE        +AA  L + A  RGS DNI+ VVV
Sbjct:  167 KEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVV 371          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.214e-30
Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            GSTA  +++  ++++VAN GDSRAV+CR G A+ +S DHKPD+ DE  RI++AGG V++    RV GVLA+SRA GD  LK YV ++PE+         EFLILA+DGLWDVVTNE A  M++
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVR 355          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.892e-30
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----------------------------------PIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            GSTA  ++L  ++++VAN GDSRAV+CR G AIA+S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV++ PE+      +  +FLILASDGLWDVV+NE A ++++                                  P +  EEA+  L + A  R S+DN++ VVV
Sbjct:  221 GSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVRMCLRGKVNGQVSSSPEREMTGVGAGNVVVGGGDLPDKACEEASLLLTRLALARQSSDNVSVVVV 407          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.892e-30
Identity = 87/193 (45.08%), Postives = 111/193 (57.51%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM--WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI--DSSLEFLILASDGLWDVVTNEEAV-------AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            D  +AI  AY  TDSEFL    +Q    G+ A+TA++    L V+NVGD RAV+  RGG A A++ DH P + DER RIE  GG+V    +G WRV   LAVSRAFGD  +KQ+V  +PE     +  D    FL+LASDGLW  V+N+EAV       A    +    +  K L   A  RGS D+IT +VV
Sbjct:  225 DVTAAIRAAYLTTDSEFL----SQGVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVDAVAAAAAAAAGVAGSTDPCKELAAMARSRGSRDDITVMVV 413          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.892e-30
Identity = 82/214 (38.32%), Postives = 127/214 (59.35%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            AA +V+ N+   ++    F    K AI  A+   D EF   +++ +  +G+TA TA + G RL++AN GD RAV+ R G AI +S+DHKP+ T E+ RIE  GG V++ G   + G L+V+RA GD  +K        +  +PE+QE  +    EFLI+  DGLWDV++++ AV + +       DPE  ++ L++EA +R + DN+T +VV F
Sbjct:  135 AAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFA-DDSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGG-VVYDG--YLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREALKRNTCDNLTVIVVCF 344          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 6.442e-30
Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI------QDPEEAAKRLMQEAYQRGSADNITCVVV 608
            +S   + E  +    GSTA  A++   R++VAN GDSRAV+CRGG  + +S DHKPD+ DE +RIE AGG  + W G  RV GVLA+SR+ GD  LK YV A PE+         E LILASDGLWDVV+NE A  + +        +   EAA  L + A  R S+DNI+ VVV
Sbjct:  177 ESGSCRCEGQKCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGA-RVLGVLAMSRSIGDAYLKPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLRRGRQRWCAEAAAVLTKLALARRSSDNISVVVV 350          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 8.414e-30
Identity = 87/207 (42.03%), Postives = 114/207 (55.07%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-------------------------KPIQDPE--EAAKRLMQEAYQRGSADNITCVVV 608
            K A+ +++   DSE    E+      GST+  A++    + VAN GDSRAV+CRG  A+ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GDR LK  ++ DPE+         + LILASDG+WDV+T+EEA  M                          K  +DP    AA+ L + A QRGS DNI+ VVV
Sbjct:  218 KKALFNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 420          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
P2C04_ORYSJ5.827e-3141.71Protein kinase and PP2C-like domain-containing pro... [more]
P2C49_ARATH7.610e-3136.09Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
PPM1F_RAT1.695e-3034.36Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
P2C51_ORYSJ1.695e-3042.93Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C03_ARATH2.214e-3053.66Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C78_ARATH2.892e-3042.78Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C77_ORYSJ2.892e-3045.08Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C27_ARATH2.892e-3038.32Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C68_ORYSJ6.442e-3047.43Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C56_ARATH8.414e-3042.03Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
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