DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 71/207 (34.30%), Postives = 112/207 (54.11%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            AA Y   ++ +N    P+  ++  +A+ +A+  TD  FL+    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKP++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV + E   ++     +   +    A+ L+  A  RGS DNIT +VV
Sbjct:  202 AARYASVHVHTNASHQPELRTNPAAALKEAFRLTDEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIEALGGFVSLMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRELTGSEDYLLLACDGFFDVVPHHEVTGLVHGHLLRHKGNGMRIAEELVAVARDRGSHDNITVMVV 408          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 82/218 (37.61%), Postives = 119/218 (54.59%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISD--TKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDR------LLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI-DSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQG 629
            A++Y + NL   L+   +   D      + + +   +S+  K+ +N     G TA+ A    ++      L  AN GD+R V+CR G AI +S DHK    +E +R+   GG ++     R+ GVLAV+RA GD  LK+ V A P   E  I +   EF I+A DGLWDVV+++EAV  ++    P EAA RL++ A +R S DNITC+VV    N G
Sbjct:  116 ASDYCQKNLHKVLLEKVRNEPDRLVTDLMDETFVEVNSKIAKATHNDI--CGCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQN---RINGVLAVTRALGDTYLKELVSAHPFTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRNFVSPREAAVRLVEFALKRLSTDNITCIVVNLTRNPG 328          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 3
Query:  147 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-----------------------PIQDPEE---AAKRLMQEAYQRGSADNITCVVV 608
            +GSTA TA+L  D ++VAN GDSRAV+CR G AI +S DHKPD+ DER RIE AGG V+     RV G+LA SRA GDR LK  V  +PE+     +S  E L+LASDGLWDV++++ A  + +                         Q+P     AA  L + A  R S+DNI+ VV+
Sbjct:  230 SGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIARFCLREETPSSLDLNRMAQEDDNDGEQNPSRSVLAATLLTRLALGRQSSDNISVVVI 409          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 77/167 (46.11%), Postives = 102/167 (61.08%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI-------QDPE-------EAAKRLMQEAYQRGSADNITCVVV 608
            GSTA  +++  ++++V+N GDSRAV+CR G AI +S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV+ DPE+         E LILASDGLWDVV NE A  + +          D +       +AA  L + A  R S+DN++ VVV
Sbjct:  221 GSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNETACGVARMCLRGAGAGDDSDAAHNACSDAALLLTKLALARQSSDNVSVVVV 387          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 77/171 (45.03%), Postives = 105/171 (61.40%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVID-SSLEFLILASDGLWDVVTNEEAVAMIKPI----------QDP-------EEAAKRLMQEAYQRGSADNITCVVV 608
            GSTA  +++  D+++VAN GDSRAV+CR G  + +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV  +PE+   + D    + LILASDGLWDVV+NE A ++ +            +DP        EA+  L + A  R S+DN++ VV+
Sbjct:  190 GSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYLKPYVSCEPEV--TITDRRDDDCLILASDGLWDVVSNETACSVARMCLRGGGRRQDNEDPAISDKACTEASVLLTKLALARNSSDNVSVVVI 358          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.215e-28
Identity = 74/204 (36.27%), Postives = 118/204 (57.84%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSS 638
            F    + +I +A+   D   L  +   +R +G+TA  A++ G +LLVAN GD RAV+CR G A+ +SRDH+P    E +RI + GG++       + GVL+V+RA GD  +K        ++A+PE Q+  +    EFLI+  DG+WDV++++ AV +++       DPE  A+ L  EA +  + DN+T +V+ F +  GG S
Sbjct:  148 FYESVEKSIHNAFLSADLA-LADDLAISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDDPERCARELAMEAKRLQTFDNLTVIVICFGSELGGGS 347          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.072e-28
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 3
Query:  186 RLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            +L  ANVGDSR V+ R GN+I ++ DHK   T E QR+E AGG +M +   RV G+LAV+R+ GD+     VV  P      I S  +FLILA DGLWDV+ +++A  +IK I +P EAAK L++ A + G+ DN+T +VV
Sbjct:  142 KLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKS---RVNGMLAVTRSLGDKFFDSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELIKDITEPNEAAKVLVRYALENGTTDNVTVMVV 279          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.617e-28
Identity = 90/234 (38.46%), Postives = 126/234 (53.85%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRH-PK-----FISDTKSAIADAYSHTDSEFLKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE----------------AAKRLMQEAYQRGSADNITCVVVR 611
            A+++   NL  NLIR  PK          K  + D + HTD EFLK  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+ AGG V      RV GVL VSR+ GD   K+  V + P+I+   +  +  F++LA DGL+ V T EEAV  I    + E+                A  RL  +A QRGSADN+T +VVR
Sbjct:  159 ASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCLEDEKIQTREGKSAADARYEAACNRLANKAVQRGSADNVTVMVVR 389          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.343e-27
Identity = 78/181 (43.09%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PIQ------DP--EEAAKRLMQEAYQRGSADNITCVVVRFLANQ 626
            GSTA  A++    ++V+N GDSRAV+ RG  A+ +S DHKPD+ DE  RIE+AGG  + W G  RV GVLA+SR+ GDR LK YV+ +PE+         E LILASDGLWDV+ N+E   + +             P+       DP  + AA  L   A Q+GS DNI+ +V+   A +
Sbjct:  326 GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQR 505          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.754e-27
Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY--------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            AA++V  NL   ++    F  + + A++ A+  TD+ F  + + N +  +G+TA  A++VG  LLVAN GD RAV+C  G AI +SRDHKP    E+ RIE +GG+V       + G L V+RA GD  ++          + A+PE+    +    EFLI+  DG+WDV  ++ AV      ++   DP    K L+ EA +R S DN++ VV+ F
Sbjct:  118 AADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVY---DGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSGDNLSVVVICF 331          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
PPM1F_MOUSE1.215e-2834.30Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
PP2C1_SCHPO1.215e-2837.61Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]
P2C75_ARATH1.215e-2844.44Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C37_ARATH1.215e-2846.11Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C24_ARATH1.215e-2845.03Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C02_ORYSJ1.215e-2836.27Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
PP2C1_YEAST2.072e-2847.52Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
ILKAP_HUMAN4.617e-2838.46Integrin-linked kinase-associated serine/threonine... [more]
P2C16_ARATH1.343e-2743.09Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C57_ORYSJ1.754e-2736.41Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
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