DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.754e-27
Identity = 78/184 (42.39%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----------------AVAMIKPIQ------DP--EEAAKRLMQEAYQRGSADNITCVVVRFLANQ 626
            GSTA  A++    ++VAN GDSRAV+CRG   + +S DHKP++ DE  RIE  GG V+    +RV GVLA+SR+ GD+ LK Y++  PE+         + LILASDGLWDV++NEE                 A A     Q      DP  + AA  L + A Q+GS DNIT VV+   A++
Sbjct:  256 GSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHR 439          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.754e-27
Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 3
Query:  147 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            AGSTA  A++   +++VAN GDSRAVI R G  +A+S DHKPD+ DE +RIE AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  212 AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.291e-27
Identity = 73/217 (33.64%), Postives = 120/217 (55.30%), Query Frame = 3
Query:    3 AAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            AA +V+ NL   ++    F  + +  +  ++ H D++F K+       +G+TA TA++ G  LL+AN GD RAV+ R G AI +S DH+P    E+ R+E  GG+V       + G+L V+RA GD  L+           + A+PE++   +    EFLI+ SDG+WDV +N+  V      ++   D +   + +++EA +RG+ DN+T V+V F
Sbjct:  116 AAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAKT----TLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGATDNLTAVLVSF 325          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.291e-27
Identity = 79/209 (37.80%), Postives = 121/209 (57.89%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK-------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGGSSFPGS 650
            F+ + +++   A++  D   +  E   +   G+TA TA+++G  LLVAN GD RAV+CR G A+ +S DH+     ER+RIED GG+        + GVLAV+RA GD  LK         +++DPEI + ++    EFLILA DG+WDV++++ AV+ ++       DP + A  L +EA +  S+DN+T +V+ F      SS P S
Sbjct:  157 FLEELENSHRKAFALADLA-MADETIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYF---EDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSSDNMTVIVICF------SSVPSS 355          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.908e-27
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            GSTA  A++  +R++VAN GDSRAV+CR G  + +S DHKPD+ DE +RI+ AGG V++    RV GVLA+SRA GD  LK YV ++PE+         E LILASDGLWDVVTNE A  +++
Sbjct:  213 GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 8.707e-27
Identity = 75/181 (41.44%), Postives = 106/181 (58.56%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------------PI--------QDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQ 626
            GSTA  A++    ++V+N GDSRAV+ RG +++ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GD+ L+ +V+ DPE+         E LILASDGLWDV++N+EA    +             P+        Q  + AA+ L + A Q GS DNI+ +V+   A +
Sbjct:  326 GSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGA-RVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKAQR 505          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.371e-24
Identity = 72/191 (37.70%), Postives = 112/191 (58.64%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            F+   K+  + A+   D+  L S        G+TA+ A+L  G  L+VA+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE    ++  +   FL+L +DG+  +V ++E    +    DP+EAA  + ++A Q G+ DN T VVV F
Sbjct:  164 FLEIDKAFASYAHLSADASLLTS--------GTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPKEAAHSVTEQAIQYGTEDNSTAVVVPF 346          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.371e-24
Identity = 71/191 (37.17%), Postives = 111/191 (58.12%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            F+   K+    A+   D+  L S        G+TA+ A+L  G  L++A+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVV F
Sbjct:  164 FLEIDKTFARHAHLSADATLLTS--------GTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVPF 346          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.097e-24
Identity = 73/204 (35.78%), Postives = 119/204 (58.33%), Query Frame = 3
Query:   18 KHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLE-FLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            +H++   L++   F+   K+    A+   D+  L          G+TA+ A+L  G  L+VA+VGDSRA++CR G    ++ DH P++ +E+ RI+ +GGFV W   G   V G LA++R+ GD  LK   V+A+PE +   +  + + FL+L +DG+  +V ++E   +I    DP+EAA+ L ++A Q G+ DN T +VV F
Sbjct:  154 EHDMEKVLVK--AFLEINKAFARHAHLSVDASLLT--------CGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVPF 347          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.097e-24
Identity = 66/161 (40.99%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  147 AGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            +G+TA+ A+L  G  L+VA+VGDSRA++CR G  + ++ DH P++ DE++RI+  GGFV W   G   V G LA++R+ GD  LK   V+A+PE +  ++  +   FL+L +DG+  +V ++E    +    DP EAA  + ++A Q G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 346          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
P2C53_ORYSJ1.754e-2742.39Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C09_ORYSJ1.754e-2754.84Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C54_ORYSJ2.291e-2733.64Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C13_ARATH2.291e-2737.80Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C49_ORYSJ3.908e-2753.66Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C07_ARATH8.707e-2741.44Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
PPM1K_MOUSE2.371e-2437.70Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
PPM1K_BOVIN2.371e-2437.17Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1K_XENLA3.097e-2435.78Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1K_HUMAN3.097e-2440.99Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
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