DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 9.011e-24
Identity = 65/173 (37.57%), Postives = 99/173 (57.23%), Query Frame = 3
Query:  147 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQR--------GSADNITCVVVRF 614
            +GSTA  AI+  D L+VAN GDSR V+ R G A  +S+DHKPD   E++RI +AGGF++ AG  RV G L ++RA GD  LK         Q V A+PE+    +    EF++LA DG+WD ++++E V  +    + E++   + ++               DN+T ++V+F
Sbjct:  158 SGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIV-AG--RVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEMNTEDSLSAVCEKLLDHCLAPVSGGDGCDNMTVIIVKF 327          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.011e-24
Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR---GGNAIA---VSRDHKPDQTDERQRIEDAGGFVMWA----GTWRVGGV------LAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA 566
            K A    +S  D +   S +  +  +G TA TA+L GD L++AN GDSRAVI      GN +    +S D KP+  +E +RI+ + G +       G +RVG        LAVSRAFGD  LK + +V++PE+    I    +FLILA+DG+WDV+TN EAV +++ +++  ++AKRL++ A
Sbjct:  144 KQACLKTFSIIDLDLKISPSIDSYCSGCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERA 325          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 110.153 bits (274), Expect = 2.622e-23
Identity = 68/176 (38.64%), Postives = 103/176 (58.52%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAA---KRLMQEAYQRG--SADNITCVVVRFLANQG 629
            G TA   ++   +++V N GD+R VI R G AIA+S DHKP+  +E QRI  AGG V ++ G+ RV   +AVSRA GD         R  +Q +   PEI+ + +    EFL++A DG+WDV+ N+  V  ++  + +  E +   + L+QEA  R   S DN++ ++VRFL  +G
Sbjct:  151 GCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAITRDPPSTDNMSVILVRFLHPEG 326          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 9.962e-23
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHK----------------------------------------PDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEA 503
            GSTA  A+LV DRL+V+N GDSRAV+CR G+ + +S DHK                                        PD+ DE+ RIE  GG V++    RV G+LA+SRA GD+ LK  V+ +P+I   V     E LILASDG+WDV++NE A
Sbjct:  241 GSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPDITITVRTVDDECLILASDGMWDVISNETA 398          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.219e-22
Identity = 67/167 (40.12%), Postives = 92/167 (55.09%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQE---AYQRGSADNITCVVVRF 614
            GSTA   I+ G++++V NVGDSR V+ + G AI++S DHKP    ER+RI+ AGG V      R+ G+LA SRA GD   K         Q V   P+I+ E I    EFL++ASDG+WD + N   V  ++    P E   R   E    +   S DN T ++V+F
Sbjct:  142 GSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVF---LQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSNDNATAILVKF 305          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.944e-22
Identity = 72/201 (35.82%), Postives = 101/201 (50.25%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            +   K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E V     EF++LA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V F
Sbjct:   99 VESVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSVVLVCF 295          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PP2C_LEICH (Protein phosphatase 2C OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.457e-22
Identity = 76/188 (40.43%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTAS--TAILVGDR--LLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDR--------LLKQYVVADPEIQ-EEVIDSSLEFLILASDGLWD-VVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            D E++ S     R+ GST +   A+  G++  L V NVGDSR V C  G  + ++ DHKP+   ERQRIE+  G V      RV G LAVSRAFGDR         L+Q V+A  ++Q ++    S +F++L  DG+++    NEE VA +K       D  E A R+ +EA +RGS DNI+C++V+F
Sbjct:   94 DQEWMDS----GREGGSTGTFFVALKEGNKVHLQVGNVGDSRVVACIDGVCVPLTEDHKPNNEGERQRIENCAGRV---ENNRVDGSLAVSRAFGDREYKLGSGSQLEQKVIALADVQHKDFTFDSNDFVLLCCDGVFEGNFPNEEVVAYVKQQLETCNDLAEVAGRVCEEAIERGSRDNISCMIVQF 274          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.439e-21
Identity = 69/212 (32.55%), Postives = 106/212 (50.00%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFL----KSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRF 614
            DT+ A  D     + E +    + +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++ F
Sbjct:  297 DTEEAEEDDEEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 506          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.879e-21
Identity = 69/197 (35.03%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  102 TDSEFLKSEN-------NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA----------DNITCVVVRF 614
            TD + + ++N          +D+G TA   +L G  L VAN GDSR VI R G AI +S DHKP+  +E  RI  AGG V   G  RV G L +SRA GD   K         Q + A P+I++ +I    EF++LA DG+W+ +++EE V  ++      +    + +E +    A          DN+T V+V+F
Sbjct:  370 TDEDQMANDNFCANMIEEPGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDG--RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQF 564          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 2.454e-21
Identity = 68/208 (32.69%), Postives = 104/208 (50.00%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRF 614
            DT+ A  D         ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++ F
Sbjct:  297 DTEEAEEDDDEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 502          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
P2C70_ORYSJ9.011e-2437.57Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C41_ARATH9.011e-2439.56Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C42_ORYSJ2.622e-2338.64Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C37_ORYSJ9.962e-2341.14Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C21_ORYSJ2.219e-2240.12Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PPM1B_MOUSE4.944e-2235.82Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PP2C_LEICH6.457e-2240.43Protein phosphatase 2C OS=Leishmania chagasi PE=2 ... [more]
PPM1G_MACFA1.439e-2132.55Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
Y0417_DROME1.879e-2135.03Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPM1G_MOUSE2.454e-2132.69Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
back to top