DY258759

Overview
NameDY258759
Unique NameDY258759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1212
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.454e-21
Identity = 70/201 (34.83%), Postives = 103/201 (51.24%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAV----AMIKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            + + K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF++LA DG+WDV++NEE      + ++   D E     ++     +GS DN++ V+V F
Sbjct:   99 VENVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.454e-21
Identity = 76/229 (33.19%), Postives = 113/229 (49.34%), Query Frame = 3
Query:    6 AEYVKHNLFSNLIRHPKFISDT-KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLV-ANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGS------ADNITCVVVRFLANQG 629
            A+Y + +L   +   P F       A+   +   D+  ++  + Q   +G TA+TA++V  +++  AN GDSR V+ R G A  +S DHKP+   E+ RI  AGGF+ +    RV G LA+SRA GD            KQ V A P++    ID   EFLILA DG+WD  ++++ V  ++      Q  E   + LM       S       DN+T  +V FL  +G
Sbjct:   71 AKYCRQHLPDIIKSQPSFWKGNYDEALKSGFLAADNALMQDRDMQEDPSGCTATTALIVDHQVIYCANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGGFIDFG---RVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVRRGIVARQSLEVICENLMDRCIASNSESCGIGCDNMTICIVAFLHGRG 296          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.454e-21
Identity = 71/179 (39.66%), Postives = 100/179 (55.87%), Query Frame = 3
Query:   90 AYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR-----GGNA----IAVSRDHKPDQTDERQRIEDAGGFVMWAG-------TWRV---GGVLAVSRAFGDRLLKQY-VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEA 566
            A +  D+E   S       +G TA + +  GD L+VANVGDSRAV+       GG A    + ++ D KP+   ER+RI +  G V            WR    G  LA+SRAFGD  +K Y V++ PE+    I +   F+ILA+DG+WDVV+NEEAV ++    + E+AAKRL++ A
Sbjct:  147 ACAAVDAELRASRRLDAVHSGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNLPQERERIMECNGRVQCLADEPGVHRVWRPDREGPGLAMSRAFGDYCVKDYGVISAPEVTHRRITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFA 325          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.205e-21
Identity = 71/200 (35.50%), Postives = 105/200 (52.50%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG-----------NAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAM----IKPIQDPEEAAKRLMQEAYQRGSADNITCVVV 608
            D + A  DAY+  D   ++    +   +GST  +A+LVG++L  ANVGDS  V+ R               + +S  H      E++R+ D GG +++    R+ G LAVSR+FGD+  K+    + V+DP      + +   F ILA DGLWD V  +EAV      IK  +   E ++ L Q++Y RGS DNIT +VV
Sbjct:  778 DYEQAFRDAYAEADDIVIE----KCEKSGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFN---RLFGSLAVSRSFGDKEYKEGEKKFCVSDPYQTTTDLTARDHFFILACDGLWDKVEYDEAVQFVQRNIKLGKSATEISELLAQDSYDRGSGDNITVLVV 970          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.467e-21
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRF 614
            ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++ F
Sbjct:  317 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 505          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 5.467e-21
Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNITCVVVRFLANQGGSSFPGS 650
            ++ +     D+G+TA  A++ G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E +  I  K  Q  E    RL+    +                  DN+TC+++ F      +  P S
Sbjct:  315 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRNTAAPQPES 515          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 5.467e-21
Identity = 71/201 (35.32%), Postives = 101/201 (50.25%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            + + K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V F
Sbjct:   99 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.139e-21
Identity = 71/201 (35.32%), Postives = 101/201 (50.25%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRF 614
            + + K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V F
Sbjct:   99 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCF 295          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.139e-21
Identity = 60/174 (34.48%), Postives = 103/174 (59.20%), Query Frame = 3
Query:  147 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSA-----DNITCVVVRF 614
            AG TA+ A++VG  L VAN GDSR+ + R G    +S+DHKPD   E++RIE AGGFV      RV G L++SRA GD   K         Q + A P+++   + ++ +FL++  DG+++   +++ +  I    K  Q+ ++AA++L+ +   + ++     DN+TC++++F
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFV---SDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNLQKAAEKLLDQLLAKDTSLGTGCDNMTCILIQF 294          
BLAST of DY258759 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.324e-21
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 3
Query:  150 GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------RLL---KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNITCVVVRF 614
            GSTA  AI+   +L+VAN GDSR VI R G A  +SRDHKP+   ER+RI  AGG++      RV G + +SRA GD      + L   KQ + A+P+I    +    +FL+LA DG+WD +++++ V  I    + E +   + +    R  A         DN+T ++V+F
Sbjct:  160 GSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMG---RVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQF 329          
The following BLAST results are available for this feature:
BLAST of DY258759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
PPM1B_RAT2.454e-2134.83Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PP2C2_SCHPO2.454e-2133.19Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
P2C48_ORYSJ2.454e-2139.66Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
SPNA_DICDI3.205e-2135.50Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
PPM1G_HUMAN5.467e-2133.51Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN5.467e-2132.02Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PPM1B_BOVIN5.467e-2135.32Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1B_HUMAN7.139e-2135.32Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PP2C6_PARTE7.139e-2134.48Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
P2C58_ORYSJ9.324e-2136.99Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258759 ID=DY258759; Name=DY258759; organism=Citrus clementina; type=EST; length=1212bp
GAGCTGCTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCA
AATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTTCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACATCACCTGTG
TCGTTGTTCGGTTCTTGGCCAATCAAGGTGGTTCATCCTTTCCTGGCTCT
GCATGAACATCCTTTCATAGCCACCGCTCTGCTTTTGTTCTCTACATGGG
CATCCTTTCAGTGGTCTACAGCTAGTAGTCATAGAAAAATTACAGTTTCG
TTGTACTTTGTAATGATAGAACATGAACAAAAAGCTTACCCCGGGCGTTA
ATGTGTATTACGTATTATCAGTCTCTGGAAAAGATGTGTCCAAAGTTTAA
CATCTGTTCCCCGGCCCTCGAAATGTACCTAGAAATGTGTAATGTATGCA
TGGTGTAAAAAAATGGGCAAAAACTTCAAAAGTTTCAATTAAAAAAAAAA
AAAAAAAAAAAAAAAACCCCACCTTTCTTTGGTAAAAATTTGGGCATTAA
AAAAAAAACTTTGCTTTTTCAATTTTTTTTCAACAAACAGGGGCCCCCTA
TCCCCTCAAAAAAAAAAATTCTTTTTTTTGCCACCCCCCCCCGAAAATCC
CCCCAAAAGGGGGGGTCCAAAAATAACCGGGGGCAAAAAGTGTTTTTTCC
CGGGGGCGCCCCCCGGGCCGCCCCCGGGTTTTCCAAAAAAAATATCCCCT
AAAAAATATTTA
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