DY258772

Overview
NameDY258772
Unique NameDY258772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1200
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: TYRB_SALTY (Aromatic-amino-acid aminotransferase OS=Salmonella typhimurium GN=tyrB PE=3 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 9.162e-45
Identity = 91/215 (42.33%), Postives = 129/215 (60.00%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F+ V     DPIL + E FK D+   K+NL +G Y  E+ + P +  V +    L  +      YLP+EGL  +    A LLFGAD+ VL++QRVAT+Q L G+G+L++ A  ++RYFP A V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +   P  S +LLH C HNPTG D TP QW+ + ++++ ++ IPF D+AYQ
Sbjct:    2 FQKVDAYAGDPILSLMERFKDDSRHDKVNLSIGLYYNEDGIIPQLKTVAEAEARLNAQPHGASLYLPMEGLNTYRHTIAPLLFGADHPVLQQQRVATIQTLGGSGALKVGADFLKRYFPDAGVWVSDPTWENHIAIFAGAGFEVSTYPWYDDATNGIRFNDLLATLNTLPARSIVLLHPCCHNPTGADLTPSQWDAVIEIVKARDLIPFLDIAYQ 216          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: TYRB_ECOLI (Aromatic-amino-acid aminotransferase OS=Escherichia coli (strain K12) GN=tyrB PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 7.756e-44
Identity = 91/215 (42.33%), Postives = 128/215 (59.53%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F+ V     DPIL + E FK D    K+NL +G Y  E+ + P +  V +    L  +      YLP+EGL  +    A LLFGAD+ VLK+QRVAT+Q L G+G+L++ A  ++RYFP + V +S PTW NH  IF  A    S Y +YD  T G+ F  ++A +K  P  S +LLH C HNPTG D T +QW+ + ++++ +  IPF D+AYQ
Sbjct:    2 FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ 216          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: TYRB_KLEPN (Tyrosine aminotransferase OS=Klebsiella pneumoniae GN=tyrB PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.463e-42
Identity = 84/215 (39.07%), Postives = 129/215 (60.00%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F+ V     DPIL + E FK D    K+NL +G Y  ++ + P +  V +    L  E      YLP+EG + + +  A LLFGA+++ LK+ R+A++Q + G+G+L++ A  ++RYFP + V +S PTW NH  IF  A    S Y ++D  T G+ FE ++A ++  P    +LLH C HNPTG D TP QW+++ +V++ +  IPF D+AYQ
Sbjct:    2 FQKVDAYAGDPILSLMERFKEDPRSDKVNLSIGLYYNDDGIIPQLQAVAEAEARLNAEPHGASLYLPMEGFSGYRQAIAPLLFGAEHTALKQNRIASIQTVGGSGALKVGADFLKRYFPESHVWVSDPTWENHIAIFEGAGFEVSTYPWFDKATNGVRFENLLAMLQTLPARDIVLLHPCCHNPTGADLTPAQWDRVVEVLKARQLIPFLDIAYQ 216          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: TYRB_PARDE (Aromatic-amino-acid aminotransferase OS=Paracoccus denitrificans GN=tyrB PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.159e-39
Identity = 85/206 (41.26%), Postives = 117/206 (56.80%), Query Frame = 1
Query:  214 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            PD IL +   F+AD  + K++LGVG Y+       ++  V  AE  MLE    K Y  + G   F K   EL+ G     LK +  AT+  + GTG+LR A  L     P  +V +S PTW NH +I N   +P   YRY+D +T G+DFEGM AD+ AA  G  +LLHGC HNPTG + T +QW +IA ++++   +P  D+AYQ
Sbjct:   10 PDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDG---LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQ 212          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: PHHC_PSEAE (Aromatic-amino-acid aminotransferase OS=Pseudomonas aeruginosa GN=phhC PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.566e-36
Identity = 84/217 (38.71%), Postives = 117/217 (53.92%), Query Frame = 1
Query:  181 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            +S F  V   P DPILG+ +A++ D    KL+LGVG Y+  +    +L  VK AE  ++E+   K Y+   G A F    AEL  GA + +L EQR    Q   GTG+LRLA   I    PG  + +S PTW  H+ +F  A +  S Y Y       LD E M+A ++  P G  +LLH C HNPTG D + + W ++ DV++ +  +P  D AYQ
Sbjct:    1 MSHFAKVARVPGDPILGLLDAYRNDPRADKLDLGVGVYKDAQGLTPILRSVKLAEQRLVEQETTKSYVGGHGDALFAARLAELALGAASPLLLEQRADATQTPGGTGALRLAGDFIAHCLPGRGIWLSDPTWPIHETLFAAAGLKVSHYPYVSADN-RLDVEAMLAGLERIPQGDVVLLHACCHNPTGFDLSHDDWRRVLDVVRRRELLPLIDFAYQ 216          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATM_YEAST (Aspartate aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=AAT1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 9.834e-31
Identity = 88/233 (37.77%), Postives = 117/233 (50.21%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLM---LERGENKEYLPIEGLAAFNKVTAELLFGADNS-----VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS---------FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            S    V  APPD +LG+SE FK   +  K++L VG Y+    +      V KA+ L+   LE  +N  YLPI G   F +   + LF           L   R++ VQ LSGTG+L +AA  +   F    + I  P+W NHKNIF +     + YRY   K   +D +G I  +K     +          I+LH C HNPTG+DPT EQWEKI D I E   +P  D+AYQ
Sbjct:   18 SSLSRVPRAPPDKVLGLSEHFKKVKNVNKIDLTVGIYKDGWGKVTTFPSVAKAQKLIESHLELNKNLSYLPITGSKEFQENVMKFLFKESCPQFGPFYLAHDRISFVQTLSGTGALAVAAKFLA-LFISRDIWIPDPSWANHKNIFQNNGFE-NIYRYSYYKDGQIDIDGWIEQLKTFAYNNQQENNKNPPCIILHACCHNPTGLDPTKEQWEKIIDTIYELKMVPIVDMAYQ 248          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: ATTY_RHIME (Tyrosine aminotransferase OS=Rhizobium meliloti GN=tatA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.736e-27
Identity = 73/214 (34.11%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            F+ +     DP+L +   F+ D    K++LGVG YR E  +  +   VK AE  +LE  ++K Y+  EG   F     EL+ G     ++   VA VQ   G+G+LRLAA LI R   G  + +  P+W NH  IF  A +  + Y ++D  +  + F+ +++ ++ A  G  +LLH   HNPTG   +  QW +IA ++ E+  +P  D+AYQ
Sbjct:    2 FDALARQADDPLLALIGLFRKDERPGKVDLGVGVYRDETGRTPIFRAVKAAEKRLLETQDSKAYIGPEGDLVFLDRLWELVGG---DTIERSHVAGVQTPGGSGALRLAADLIAR-MGGRGIWLGLPSWPNHAPIFKAAGLDIATYDFFDIPSQSVIFDNLVSALEGAASGDAVLLHASCHNPTGGVLSEAQWMEIAALVAERGLLPLVDLAYQ 211          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC2_BOVIN (Putative aspartate aminotransferase, cytoplasmic 2 OS=Bos taurus GN=GOT1L1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.991e-15
Identity = 53/200 (26.50%), Postives = 98/200 (49.00%), Query Frame = 1
Query:  238 EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE-NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            + +K D +  K+ L      T + +P+V  VV+K    +  +   N EY P+ G+ +F + +  LLFG ++ V+ E R   VQ +  +G+ +L A  ++ +   ++++ I S     H  IF D      E+ ++D   + LD   ++  +K AP G   ++    +       TP QW ++  +++ K   PFFD+ YQ
Sbjct:   22 KTYKQDDNPNKMFLAYKVCMTSKGRPWVSSVVRKTRMQIAQDPSLNYEYTPVMGMKSFVQASLNLLFGKNSQVIVENRAGGVQTVGDSGAFQLGAQFLKSWCQSSQIVYIVSSQKEPHGLIFQDMGFTVYEHTFWDSAHLCLDPNMLLDVVKHAPHGCVFVIGSMGN----CQLTPSQWTQLMTLMKSKEIFPFFDIPYQ 217          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC2_HUMAN (Putative aspartate aminotransferase, cytoplasmic 2 OS=Homo sapiens GN=GOT1L1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 6.404e-14
Identity = 55/200 (27.50%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  238 EAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE-NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            + +K D    K+ L      T E  P+V  VV+K    +  +   N EYLP  GL +F + +  LLFG  +  + E RV  V  +  +G+ +L    +  +   A+++ I S     H  +F D      EY  +DPK + +D + ++  ++  P G  +++     N      TP  W K+  +I+ K   PFFD+  Q
Sbjct:   22 KTYKQDDYPNKIFLAYRVCMTNEGHPWVSLVVQKTRLQISQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLRAWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCVLVM----GNIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQ 217          
BLAST of DY258772 vs. ExPASy Swiss-Prot
Match: AATC2_MOUSE (Putative aspartate aminotransferase, cytoplasmic 2 OS=Mus musculus GN=Got1l1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.744e-11
Identity = 57/198 (28.79%), Postives = 91/198 (45.96%), Query Frame = 1
Query:  244 FKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL-ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 831
            ++ D    KL L      TEE  P+V  VV K    + E    + EYLP+ GL +F + + ELLFG  +  + E+RV  V  +  +G+ +L A  ++ +    K++ I S        IF D      EY  ++   +  D    +  ++  P GS +++     N T    T  QW K+  +I+ K   PFFD+  Q
Sbjct:   24 YRQDGYPSKLFLAYKVCMTEEGHPWVSLVVHKTRLQIAEDPSLDYEYLPLVGLKSFIQSSLELLFGKHSEAIAEKRVGGVHIVGESGAFQLGAQFLKTWRKNVKIVCIVSCQKEQCGLIFQDMGFIVYEYSIWNASDLCSDPSMFVEVLQHIPVGSILVI----GNITDCKFTQNQWTKLMSIIKSKQIFPFFDIPCQ 217          
The following BLAST results are available for this feature:
BLAST of DY258772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
TYRB_SALTY9.162e-4542.33Aromatic-amino-acid aminotransferase OS=Salmonella... [more]
TYRB_ECOLI7.756e-4442.33Aromatic-amino-acid aminotransferase OS=Escherichi... [more]
TYRB_KLEPN1.463e-4239.07Tyrosine aminotransferase OS=Klebsiella pneumoniae... [more]
TYRB_PARDE1.159e-3941.26Aromatic-amino-acid aminotransferase OS=Paracoccus... [more]
PHHC_PSEAE1.566e-3638.71Aromatic-amino-acid aminotransferase OS=Pseudomona... [more]
AATM_YEAST9.834e-3137.77Aspartate aminotransferase, mitochondrial OS=Sacch... [more]
ATTY_RHIME1.736e-2734.11Tyrosine aminotransferase OS=Rhizobium meliloti GN... [more]
AATC2_BOVIN1.991e-1526.50Putative aspartate aminotransferase, cytoplasmic 2... [more]
AATC2_HUMAN6.404e-1427.50Putative aspartate aminotransferase, cytoplasmic 2... [more]
AATC2_MOUSE1.744e-1128.79Putative aspartate aminotransferase, cytoplasmic 2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258772 ID=DY258772; Name=DY258772; organism=Citrus clementina; type=EST; length=1200bp
CGTAAAATCACATAGATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGT
GGGTTTGGATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTG
GATCTTTTATTCTGCTTCATGGTTGTGCTCACAACCCCACTGGCATTGAT
CCAACCCCTGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAA
TCATATCCCATTTTTCGATGTTGCCTACCAGGTATGATTTCCTGAAATCA
AGATATAAAATGAATCTCAAATGTCATCAGACCTGCTCAAATGGAAGTTA
AAGAAATTTCAAAGTTCATTCCGTAAATTTAACTCTTTGAAGAACCCCCC
CCCACAAAAAAAACCCTTTGAAGTACTTTAGGGAATTTCCAAGTGGAAAC
CCTTTACAAAGAAGCTCCCACCTGTGGAAAATTGGTTGGCCAACCCCGGG
GAAGGGGAGCTTTTCTTGTTGCTCCAATCACATAAAAAAAAAAAACCCTT
GGTTCCTTTATTCACAAAAAAGAAAATGGGAAACAAAATAAAAATGTTTT
GGCCTTGTTTTCCCCCCCCCTCTGAATATTTTAAAACAAAAAAAGGGGAG
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