DY258811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLPVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ V+ GGA ++E++ L + ++ + GK I ++A AL++IP+ L +NAG D ++L K+ +H G G+D+ G AD + EP VK AI +A+EAA +IL +D+ + Sbjct: 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH---KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 ++ V+ GGA ++E++ L + ++ + GK I ++A AL++IP+ L +NAG D ++L K+ +H G G+D+ G AD + EP VK AI +A+EAA +IL +D+ + Sbjct: 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH---KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 3 Query: 15 VVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALP------TGEGA----PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ GGGA +M +S LR+ + G Q + A+EVIPR L N G + +LR KHA +G G +G+D TG + D VWEP VK+ I A E+AC+IL +D+ V K Sbjct: 422 LLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSK 554
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP-------YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +V G GA + +S YL + ++ + Q I +A+A+ IP+QL NAG D+T+++ +LR H + + P +G+D+N +AD V+EP V KI ++ ATEAA IL +D+ +K Sbjct: 401 ESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCH--NSSQSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIK 529
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L +IP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAP---------YGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ VV GGGA++ +S YL + ++ + Q I +A+AL +IPR L NA D+T++ KLR HA YG+D+ G I D+ V EP++ K+ ++ +A EA IL +D ++K Sbjct: 409 ESGKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYGLDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRIDTSIK 541
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 404 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532 The following BLAST results are available for this feature:
BLAST of DY258811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258811 ID=DY258811; Name=DY258811; organism=Citrus clementina; type=EST; length=733bpback to top |