DY258811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK 383 ++ ++ GGA ++E++ L + ++ + GK Q I ++A+AL+VIPR L +NAG D + L K+ H +G GVD+ G AD V P V AI +A+EAA +IL +D+ + K Sbjct: 403 EDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAH---KEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 39/121 (32.23%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDE 365 K ++AGGG+ ++E ++ L + +R + G+ I ++++ALE+IP L +NAG +A V+ +LR +HA GE G+++ G + + V +P +V I+AI A E +I+ +D+ Sbjct: 405 KQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHA--NGEKTA-GINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDD 522
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K S VAG GA ++ +S + E++ +AGK + ++ +AL +P +CDNAG D+ +++ +LR +HA G+DI G +AD V E VK+ +++A EA IL VD+ +K Sbjct: 396 KESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHA---NGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 43/129 (33.33%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKL--RQKHALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 380 ++++VV GGGA++ +S L + + + K I+ YA++L IP+ L NAG D+ +++ L Q + G+ + G+D+ +G I D+F + EP+V K+ ++ AATEAA IL ++E + P Sbjct: 406 ESNSVVPGGGAVECALSLMLEKFAFTVNSKEHVAIHRYAESLLSIPKILSTNAGLDSNELVANLLSSQSREMANSSGSKFLGIDVTSGKIQDNFEFGIIEPSVNKMKSLKAATEAAISILRINEVIILP 534
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 15 VVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANF-VWEPAVVKINAINAATEAACLILSVDETV 371 +VAGGGA++ E++K LR ++R + GK Q N++A ALE L + AG D L ++R KHA G+D+ I D+ V + VK + +ATEAA IL +D+ + Sbjct: 400 IVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHATGLKNA---GIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMI 516
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 45/129 (34.88%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 ++ +VV GGGA++ +S YL + ++ + Q I +A++L +IP L NA DATD++ KLR H P + + G+D+ G D+ V+EP +VK ++ ATEAA IL +D+ +K Sbjct: 407 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLAVNAAQDATDLVAKLRAFHNEAQVNPERKNLKWIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLIK 535
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 12 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKH----ALPTGEGAPY-GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 +VV GGGA++ +S YL + ++ + Q I +A++L VIP L NA D+TD++ KLR H P + + G+D+ G D+ V+EP +VK+ ++ ATEAA IL +D+ +K Sbjct: 407 SVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPQ_CANAL (T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 45/123 (36.59%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K++ ++ G GA+++E+ K + ++ G Q I S+AKA EVIPR L + +G D++++L+KL HA TG A G+DI++G +AD+ V + K +AI+ A +A ILS+D+ + Sbjct: 401 KDNRLLPGAGAVEIELMKRITAY-QSTPGLLQLAIKSFAKAFEVIPRVLAETSGHDSSEILSKLHAAHAEDTGLRA--GIDIDSGEVADT---AVLDILATKKSAIDLAVDATNTILSIDQII 517
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETV 371 K++ ++ G GA DM++ L G Q I Y +A EV+PR + +NAG D TDV++KL H GE V+ G D+ +++ + K +AI ATE +L+VD+ V Sbjct: 404 KDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVV 526
BLAST of DY258811 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 43/126 (34.13%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 3 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQK--HALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 374 K + V GGG +M +SK + E++ I GK + ++A+AL +P L DNAGFD++++++KLR + + T G+D+N G IAD + E +K +++A+EAA ++L VD ++ Sbjct: 396 KETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTS-----GLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIR 516 The following BLAST results are available for this feature:
BLAST of DY258811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258811 ID=DY258811; Name=DY258811; organism=Citrus clementina; type=EST; length=733bpback to top |