DY258821

Overview
NameDY258821
Unique NameDY258821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.721e-57
Identity = 108/211 (51.18%), Postives = 130/211 (61.61%), Query Frame = 2
Query:  164 FSSVSSAFPPKPSLRF--SSPKNDNG-----------VVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            F++ + A  PKP L    +SP    G           VV  A+ + NN P+TGV+F PFEEVKK    +P     SLAR +F D  EA INEQINVEYNVSYVYH+M+AYFDRDNVA+KGL                K MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME                HKVA++NND QLADFVES++
Sbjct:    9 FTAANPALSPKPLLPHGSASPSVSLGFSRKVGGGRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEF 219          

HSP 2 Score: 48.1358 bits (113), Expect = 2.721e-57
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 3
Query:  780 QKISEYVAQLRRVCQGHGVWHFDQMLL 860
            +KIS+Y+ QLR + +GHGVWHFDQMLL
Sbjct:  228 KKISDYITQLRMIGKGHGVWHFDQMLL 254          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.721e-57
Identity = 100/184 (54.35%), Postives = 119/184 (64.67%), Query Frame = 2
Query:  206 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + ND QL DF+ES++
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEF 212          

HSP 2 Score: 48.521 bits (114), Expect = 2.721e-57
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3
Query:  768 GRSHQKISEYVAQLRRVC-QGHGVWHFDQMLL 860
            G +  K+S+YVAQLRRV  +GHGVWHFDQMLL
Sbjct:  217 GEAINKVSKYVAQLRRVGNKGHGVWHFDQMLL 248          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.032e-57
Identity = 112/228 (49.12%), Postives = 133/228 (58.33%), Query Frame = 2
Query:  149 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L +I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++ + + +  K I
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKI 225          

HSP 2 Score: 51.9878 bits (123), Expect = 6.032e-57
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  774 SHQKISEYVAQLRRVCQGHGVWHFDQMLL 860
            S +KISEYVAQLRRV +GHGVWHFDQ LL
Sbjct:  221 SIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 191.43 bits (485), Expect = 7.864e-57
Identity = 112/228 (49.12%), Postives = 132/228 (57.89%), Query Frame = 2
Query:  149 ALNPLFSSVSSAFPPKPS-------------LRFSSPK-NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            AL P   S  S F PKPS             L F + K     + VCAS      PLTGVIF PFEEVKK    VPT PQ+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++NND Q+ADF+ES++ + + +  K I
Sbjct:    2 ALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGSRNLRVCAS----TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKI 225          

HSP 2 Score: 51.9878 bits (123), Expect = 7.864e-57
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  774 SHQKISEYVAQLRRVCQGHGVWHFDQMLL 860
            S +KISEYVAQLRRV +GHGVWHFDQ LL
Sbjct:  221 SIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.012e-53
Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 2
Query:  242 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            VCA+ +   +PLTGVIF PF+E+KK+   VP  P +SL+R  ++D+ EAAINEQINVEYNVSYVYH++FAYFDRDN+ALKGL                KL++YQN RGG+V L  I  P SEF+H EKGDALYAME                H VA++NND QLADF+ES++   + +  K I
Sbjct:   48 VCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKI 230          

HSP 2 Score: 46.595 bits (109), Expect = 1.012e-53
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  774 SHQKISEYVAQLRRVCQGHGVWHFDQMLL 860
            S +KI+EYV QLR V +GHGVWHFDQ LL
Sbjct:  226 SIKKIAEYVTQLRLVGKGHGVWHFDQRLL 254          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.319e-53
Identity = 92/178 (51.69%), Postives = 112/178 (62.92%), Query Frame = 2
Query:  257 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            +A  +PLTGVIF PFEEVKK+   VP+VP +SLAR  F D+CE+ INEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA +NND+++  F+E +Y   + +  K I
Sbjct:   46 SATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKI 223          

HSP 2 Score: 53.1434 bits (126), Expect = 1.319e-53
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 3
Query:  780 QKISEYVAQLRRVCQGHGVWHFDQMLLMG 866
            +KISEYVAQLRRV +GHGVWHFDQ LL G
Sbjct:  221 KKISEYVAQLRRVGKGHGVWHFDQRLLHG 249          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.809e-53
Identity = 96/178 (53.93%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  257 NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            +A+  PLTGVIF PFEEVKKE   VPT  Q+SLAR  + D+CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                 KLM+YQN RGG+V L  I    SEF+H EKGDALYAME                H VA++N D QLADF+ES++ + + +  K I
Sbjct:   47 SASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKI 224          

HSP 2 Score: 49.2914 bits (116), Expect = 3.809e-53
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 3
Query:  780 QKISEYVAQLRRVCQGHGVWHFDQMLL 860
            +KISEYVAQLR V +GHGVWHFDQ LL
Sbjct:  222 KKISEYVAQLRMVGKGHGVWHFDQSLL 248          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 8.575e-45
Identity = 103/222 (46.40%), Postives = 130/222 (58.56%), Query Frame = 2
Query:  242 VCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI*VCCSAEKSL---PGAWCLAL*SNAAHGGRKLSHDGEHI 898
            VCA+ NA  +PL GVIF PF+E+KK+   VP    + LAR  + DD E+AINEQINVEYNVSYVYHA+FAYFDRDN+ALKGL                +L++YQN RGG+V L  I  P SEF+H+EKGDALYAME                H VA +NND Q ADF+ES++   + K  K I    +  + +    G W         H  +KL HD +H+
Sbjct:   46 VCAASNAP-APLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVW---------HFDQKLLHDEDHV 257          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.458e-20
Identity = 55/148 (37.16%), Postives = 75/148 (50.68%), Query Frame = 2
Query:  347 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            +S AR  +  + EA IN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+YQNKRGG++ LQ I  P    D  E G  L AM+                HK+   ++D Q+ADF+ES++   + K  K++
Sbjct:    3 VSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKEL 146          

HSP 2 Score: 25.409 bits (54), Expect = 7.458e-20
Identity = 11/30 (36.67%), Postives = 20/30 (66.67%), Query Frame = 3
Query:  771 RSHQKISEYVAQLRRVCQGHGVWHFDQMLL 860
            +S +++S+Y+  L+RV  G G + FD+  L
Sbjct:  141 KSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.352e-18
Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                 KL+++QN+RGG++ LQ +  P    D  E G  L A+E                HKV +++ND  + DF+E+ Y   + K  K++
Sbjct:    3 SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKEL 145          
The following BLAST results are available for this feature:
BLAST of DY258821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
FRI1_ARATH2.721e-5751.18Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_MAIZE2.721e-5754.35Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI_MALXI6.032e-5749.12Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN7.864e-5749.12Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI3_VIGUN1.012e-5351.91Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI1_PEA1.319e-5351.69Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI_PHAVU3.809e-5353.93Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI2_SOYBN8.575e-4546.40Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRIS_LYMST7.458e-2037.16Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_PAGBE2.352e-1836.73Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258821 ID=DY258821; Name=DY258821; organism=Citrus clementina; type=EST; length=1148bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGACAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTACACGAGCAGGTAGAAGCCATCAAAAGATATCTGAGTATGTT
GCTCAGCTGAGAAGAGTTTGCCAGGGGCATGGTGTCTGGCACTTTGATCA
AATGCTGCTCATGGGGGAAGGAAGTTGTCGCATGATGGTGAACACATCTT
GGCTTGTCACCCGAATATCCCTACTAAAGCTTTATATTTATGGTTGTTTT
TGTTCCAAAATTCCTAAATTTAAAAAACTTTCCGGGCTTGCCATTTAATG
CAAAAAACTTTTTAACTTTGGTTTGAAAAGAAAAATGGGCAAAATGGGGG
GTAAATCCAAGGCGGAATCCTTAACTTTTTCTTCCCTTTGTAAAAAAACC
CCCTCTTAAAAATTTCAAATTTTTTGACAATTTTTGGGGTGAGAATAT
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