DY258821

Overview
NameDY258821
Unique NameDY258821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.600e-17
Identity = 56/152 (36.84%), Postives = 72/152 (47.37%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A   ND  L DF+E+ Y   + K  K++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.600e-17
Identity = 56/152 (36.84%), Postives = 72/152 (47.37%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A   ND  L DF+E+ Y   + K  K++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.396e-17
Identity = 54/147 (36.73%), Postives = 71/147 (48.30%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P    +  E G+ L A +                HK+A+   D  L DF+ES+Y   + K  K +
Sbjct:    3 SQVRQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQL 145          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_SALSA (Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.435e-17
Identity = 52/147 (35.37%), Postives = 72/147 (48.98%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  DCEAAIN QIN+E   SYVY +M  YFDRD+ AL                   KLM+ QN+RGG++ LQ +  P    +  E G  + A+E                HKV +++ND  + DF+E+ Y   + K  K++
Sbjct:    3 SQVRQNFHQDCEAAINRQINLELYASYVYLSMAYYFDRDDQALHNFAKFFKNQSHEEREHAEKLMKVQNQRGGRIFLQDVKKP----EKDEWGSGVEALESSLQLEKSVNQSLLDLHKVCSEHNDPHMCDFIETHYLDEQVKSIKEL 145          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_TRIVU (Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 7.565e-17
Identity = 56/152 (36.84%), Postives = 70/152 (46.05%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AME                HK+A   ND  L DF+E+ Y   + K  K +
Sbjct:    2 TTSSPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLDEQVKAIKQL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 7.565e-17
Identity = 55/152 (36.18%), Postives = 70/152 (46.05%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +    L AM                 HK+A   ND  L DF+E+ Y   + K  K++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 9.880e-17
Identity = 54/152 (35.53%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  +LM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A + ND  L DF+E+ Y   + +  K++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.566e-16
Identity = 44/137 (32.12%), Postives = 63/137 (45.99%), Query Frame = 2
Query:  347 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            +SL R  + ++CEA +N+QIN+E   SYVY  M  +F+RD+VAL G                 KLM YQN RGG++ LQ I  P            L+AM+                  V  ++ D    DF+ ++Y
Sbjct:    1 MSLCRQNYHEECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAP----PQLSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEY 133          

HSP 2 Score: 29.261 bits (64), Expect = 2.566e-16
Identity = 14/33 (42.42%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  771 RSHQKISEYVAQLRRVCQGHGVWHFDQMLLMGE 869
            +S +K+S+Y+  L RV  G G + FD+  L GE
Sbjct:  139 QSMKKLSDYITNLIRVGNGLGEYTFDKETLHGE 171          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_PIG (Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 2.875e-16
Identity = 56/147 (38.10%), Postives = 71/147 (48.30%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ Q +RG ++ LQ I+ P  E D  E G  L AME                HK+A   ND  L DF+E+ Y   + K  K++
Sbjct:    7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHGGRGHAEKLMKLQTQRGARIFLQDIMKP--ERDDWENG--LTAMEFALHVVKNVYQSLLELHKLATDKNDPHLCDFIETHYLHEQVKAIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_SHEEP (Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 4.903e-16
Identity = 53/152 (34.87%), Postives = 72/152 (47.37%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  +LM+ QN+RG ++ LQ I  P    D  +  + L AME                HK+A + ND  L DF+E+ Y   + +  K++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGARIFLQDIKKP----DRDDWENGLNAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKEL 149          
The following BLAST results are available for this feature:
BLAST of DY258821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
FRIH_FELCA2.600e-1736.84Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH_CANFA2.600e-1736.84Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRIH2_XENLA3.396e-1736.73Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH_SALSA4.435e-1735.37Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1[more]
FRIH_TRIVU7.565e-1736.84Ferritin heavy chain OS=Trichosurus vulpecula GN=F... [more]
FRIH_RAT7.565e-1736.18Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FRIH_BOVIN9.880e-1735.53Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH1_SCHMA2.566e-1632.12Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_PIG2.875e-1638.10Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV... [more]
FRIH_SHEEP4.903e-1634.87Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258821 ID=DY258821; Name=DY258821; organism=Citrus clementina; type=EST; length=1148bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGACAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTACACGAGCAGGTAGAAGCCATCAAAAGATATCTGAGTATGTT
GCTCAGCTGAGAAGAGTTTGCCAGGGGCATGGTGTCTGGCACTTTGATCA
AATGCTGCTCATGGGGGAAGGAAGTTGTCGCATGATGGTGAACACATCTT
GGCTTGTCACCCGAATATCCCTACTAAAGCTTTATATTTATGGTTGTTTT
TGTTCCAAAATTCCTAAATTTAAAAAACTTTCCGGGCTTGCCATTTAATG
CAAAAAACTTTTTAACTTTGGTTTGAAAAGAAAAATGGGCAAAATGGGGG
GTAAATCCAAGGCGGAATCCTTAACTTTTTCTTCCCTTTGTAAAAAAACC
CCCTCTTAAAAATTTCAAATTTTTTGACAATTTTTGGGGTGAGAATAT
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