DY258821

Overview
NameDY258821
Unique NameDY258821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI1_RANCA (Ferritin, higher subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 6.404e-16
Identity = 51/147 (34.69%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  DCEAAIN  +N+E   SY Y +M  YFDRD++AL  +                KLM+ QNKRGG++ LQ +  P    +  E G+ L AM+                HKV +   D  L DF+E++Y   + K  K +
Sbjct:    3 SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQL 145          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FTMT_HUMAN (Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.364e-16
Identity = 58/155 (37.42%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  332 PTVPQL--SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            PT P    S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM  QN+RGG+++LQ I  P  E D  E G  L+AME                H +A+   D  L DF+E+ Y   + K  K++
Sbjct:   58 PTGPAAGPSRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKP--EQDDWESG--LHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKEL 208          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.364e-16
Identity = 51/137 (37.23%), Postives = 65/137 (47.45%), Query Frame = 2
Query:  347 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            +SL R  F ++CE  IN QIN+E   SY+Y AM  +FDRD+VAL G                 KLM YQ  RGG++  Q I  P +     E    L AME                  VANKNND Q  +F+E ++
Sbjct:    1 MSLVRQNFHEECERGINRQINMELYASYLYLAMSQHFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEF 133          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.427e-15
Identity = 53/134 (39.55%), Postives = 67/134 (50.00%), Query Frame = 2
Query:  389 AINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            AIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P  E+D  E G  L AME                HK+A   ND  L DF+E+ Y   + K  K++
Sbjct:    1 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKEL 130          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.427e-15
Identity = 53/137 (38.69%), Postives = 67/137 (48.91%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPL-SEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S AR  F  +CE AIN+QINVE   +Y Y A F YFDRD+V+                    KL +YQNKR G+V+   I  P  +EF   E      AM                 H+VA+KNND  LADF+ES++
Sbjct:    4 SRARQSFATECENAINKQINVELQAAYDYMAFFTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEF 135          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIM_SALSA (Ferritin, middle subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.151e-15
Identity = 49/136 (36.03%), Postives = 64/136 (47.06%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  +  DCE AIN  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QNKRGG++ LQ I  P    +  E G+ L AM+                HK+A+   D  L DF+E+ Y
Sbjct:    3 SQIRQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKP----ERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI3_RANCA (Ferritin, lower subunit OS=Rana catesbeiana PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.247e-15
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  F  DCEA +N  +N++++ SYVY +M +YF+RD+VAL                   KL+EYQN+RGG+V LQS+  P    +  +  + L A++                H VA   +D  + DF+ES Y
Sbjct:    3 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKP----ERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIM_TRENE (Ferritin, middle subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.514e-14
Identity = 46/136 (33.82%), Postives = 64/136 (47.06%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G  L A++                HK+A+ + D  + DF+E+ Y
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIML_PAGBE (Ferritin, liver middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.514e-14
Identity = 46/136 (33.82%), Postives = 64/136 (47.06%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G  L A++                HK+A+ + D  + DF+E+ Y
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FTMT_MOUSE (Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 5.994e-14
Identity = 54/147 (36.73%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM+ QN+RGG++ LQ I  P  + D  E G  L AME                H +A++  D  L DF+E+ Y   + K  K++
Sbjct:   62 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALYNFSKYFLRQSLEEREHAEKLMKLQNQRGGRICLQDIKKP--DKDDWECG--LRAMECALLLEKNVNQSLLDLHTLASEKGDPHLCDFLETHYLHEQVKSIKEL 204          
The following BLAST results are available for this feature:
BLAST of DY258821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
FRI1_RANCA6.404e-1634.69Ferritin, higher subunit OS=Rana catesbeiana PE=1 ... [more]
FTMT_HUMAN8.364e-1637.42Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE... [more]
FRIH_ECHGR8.364e-1637.23Ferritin heavy chain OS=Echinococcus granulosus PE... [more]
FRIH_RABIT1.427e-1539.55Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIH2_SCHMA1.427e-1538.69Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIM_SALSA4.151e-1536.03Ferritin, middle subunit OS=Salmo salar PE=2 SV=1[more]
FRI3_RANCA9.247e-1533.82Ferritin, lower subunit OS=Rana catesbeiana PE=1 S... [more]
FRIM_TRENE3.514e-1433.82Ferritin, middle subunit OS=Trematomus newnesi PE=... [more]
FRIML_PAGBE3.514e-1433.82Ferritin, liver middle subunit OS=Pagothenia berna... [more]
FTMT_MOUSE5.994e-1436.73Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258821 ID=DY258821; Name=DY258821; organism=Citrus clementina; type=EST; length=1148bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGACAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTACACGAGCAGGTAGAAGCCATCAAAAGATATCTGAGTATGTT
GCTCAGCTGAGAAGAGTTTGCCAGGGGCATGGTGTCTGGCACTTTGATCA
AATGCTGCTCATGGGGGAAGGAAGTTGTCGCATGATGGTGAACACATCTT
GGCTTGTCACCCGAATATCCCTACTAAAGCTTTATATTTATGGTTGTTTT
TGTTCCAAAATTCCTAAATTTAAAAAACTTTCCGGGCTTGCCATTTAATG
CAAAAAACTTTTTAACTTTGGTTTGAAAAGAAAAATGGGCAAAATGGGGG
GTAAATCCAAGGCGGAATCCTTAACTTTTTCTTCCCTTTGTAAAAAAACC
CCCTCTTAAAAATTTCAAATTTTTTGACAATTTTTGGGGTGAGAATAT
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