DY258821

Overview
NameDY258821
Unique NameDY258821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FTMT_BOVIN (Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.828e-14
Identity = 52/147 (35.37%), Postives = 65/147 (44.22%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            S  R  F  D EAAIN QIN+E   SYVY +M  YF RD+VAL                   KLM  QN+RGG + LQ I  P    D  +    L AME                H +A+   D  L DF+E+ Y   + K  K++
Sbjct:   66 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALHNFARYFLRLSREEAEHAEKLMRLQNQRGGLICLQDIKKP----DQNDWKSGLNAMECALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVKSIKEL 208          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIMS_PAGBE (Ferritin, spleen middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.975e-13
Identity = 45/136 (33.09%), Postives = 63/136 (46.32%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  +  DCEAA+N  IN+E   SY Y +M  YF RD+VAL G                 KL+ +QN RGG++ LQ I  P    +  E G+ +  M+                HK+A+   D  + DF+E+ Y
Sbjct:    3 SQVRQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGNGVDVMQCALQLEKNVNQALLDLHKIASGKVDPHMCDFLETHY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRI_PACLE (Ferritin OS=Pacifastacus leniusculus PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.655e-13
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  RH + +DCE  IN+QIN+E+  SYVY +M  YFDRD+++L G                 KLM+YQNKRG ++ LQ+I  P  +    E G+   A++                   A+K ND  L + +E ++
Sbjct:    3 SQIRHNYHEDCEP-INKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARIVLQAIAAPSLQ----EWGNLHDALQAALDLENEVNQSLLDLDATASKINDPHLTNMLEGEF 133          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FHL17_HUMAN (Ferritin heavy polypeptide-like 17 OS=Homo sapiens GN=FTHL17 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.632e-11
Identity = 50/149 (33.56%), Postives = 68/149 (45.64%), Query Frame = 2
Query:  344 QLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYYTSR*KPSKDI 790
            Q S  R K+  +C+AAIN  I +E   SY+Y +M  YF+RD+VAL+                  KLM  QN RGG + L  I  P  E    E G  L AME                +++A +  D QL  F+ES Y   + K  K++
Sbjct:    5 QPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKP--ECQGWESG--LVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKEL 149          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIL1_MOUSE (Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.749e-11
Identity = 40/136 (29.41%), Postives = 61/136 (44.85%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L+E+QN RGG+   Q +  P  +    E G    AME                H + +   D  L DF+ES Y
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDVQKPSQD----EWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLESHY 134          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIL_XENLA (Ferritin light chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 40/136 (29.41%), Postives = 62/136 (45.59%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  + ++ EA +N   N+E   SY+Y ++  YFDRD+VAL                     +++QNKRGG+V LQ +  P    D  E G+   AME                HK+A  + D  + D++E ++
Sbjct:    5 SQIRQNYHEESEAGVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKP----DDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEF 136          
BLAST of DY258821 vs. ExPASy Swiss-Prot
Match: FRIL_RABIT (Ferritin light chain OS=Oryctolagus cuniculus GN=FTL PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 39/136 (28.68%), Postives = 63/136 (46.32%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKY 757
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AME                H + + + D  L DF+E+ +
Sbjct:    3 SQIRQNYSPEVEAAVNHLVNLHLRASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREAAERLLKMQNQRGGRALFQDVQKPSQD----EWGKTLNAMEAALALEKNLNQALLDLHALGSAHTDPHLCDFLENHF 134          
The following BLAST results are available for this feature:
BLAST of DY258821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
FTMT_BOVIN7.828e-1435.37Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2... [more]
FRIMS_PAGBE2.975e-1333.09Ferritin, spleen middle subunit OS=Pagothenia bern... [more]
FRI_PACLE8.655e-1333.82Ferritin OS=Pacifastacus leniusculus PE=1 SV=1[more]
FHL17_HUMAN1.632e-1133.56Ferritin heavy polypeptide-like 17 OS=Homo sapiens... [more]
FRIL1_MOUSE4.749e-1129.41Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=... [more]
FRIL_XENLA8.101e-1129.41Ferritin light chain, oocyte isoform OS=Xenopus la... [more]
FRIL_RABIT8.101e-1128.68Ferritin light chain OS=Oryctolagus cuniculus GN=F... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258821 ID=DY258821; Name=DY258821; organism=Citrus clementina; type=EST; length=1148bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGACAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTACACGAGCAGGTAGAAGCCATCAAAAGATATCTGAGTATGTT
GCTCAGCTGAGAAGAGTTTGCCAGGGGCATGGTGTCTGGCACTTTGATCA
AATGCTGCTCATGGGGGAAGGAAGTTGTCGCATGATGGTGAACACATCTT
GGCTTGTCACCCGAATATCCCTACTAAAGCTTTATATTTATGGTTGTTTT
TGTTCCAAAATTCCTAAATTTAAAAAACTTTCCGGGCTTGCCATTTAATG
CAAAAAACTTTTTAACTTTGGTTTGAAAAGAAAAATGGGCAAAATGGGGG
GTAAATCCAAGGCGGAATCCTTAACTTTTTCTTCCCTTTGTAAAAAAACC
CCCTCTTAAAAATTTCAAATTTTTTGACAATTTTTGGGGTGAGAATAT
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