DY258824

Overview
NameDY258824
Unique NameDY258824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.962e-48
Identity = 97/178 (54.49%), Postives = 127/178 (71.35%), Query Frame = 3
Query:  150 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCES-GPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS--FIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            Y  LA GQ+PKF+V AC+DSRVCPS+IL FQPGEAF+VRN+ANMVPP ++   S   AA+E+AV  +KVENI+VIGHS CGGI  LMS+ D+  P+  FI  WV +G  A+   KA  ++L F   C+ CEKE+VN SL NLLTYP++ + +    LSL G +Y+FV+  F+ W LD+
Sbjct:    5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDF 182          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.449e-22
Identity = 54/177 (30.51%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  105 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYN 635
            FL F+++ F +    ++ LA  Q+P+ + I+C+DSR+ P  +   +PG+ F++RN  N+VP     P   +A++E+AV +++V +I++ GHS CG + A+ S Q  +    +  W+    +AR+  +A   S     + +   +E+V   L NL T+P +   +  G ++LHG  Y+
Sbjct:    8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHS-DLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYD 183          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.449e-22
Identity = 54/177 (30.51%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  105 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYN 635
            FL F+++ F +    ++ LA  Q+P+ + I+C+DSR+ P  +   +PG+ F++RN  N+VP     P   +A++E+AV +++V +I++ GHS CG + A+ S Q  +    +  W+    +AR+  +A   S     + +   +E+V   L NL T+P +   +  G ++LHG  Y+
Sbjct:    8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHS-DLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYD 183          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.568e-21
Identity = 61/180 (33.89%), Postives = 95/180 (52.78%), Query Frame = 3
Query:  105 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPSFIRSWVLVGKNARLNTKA---ASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYN 635
            FL F++  +    + +++LA  QAPK + IAC+DSRV P  +   +PGE F++RN  N+VP     P   +A++E+AV  + V +I+V GHS CG + A+ S    +    +  W+   + AR    A   AS +   D    H    +V   L NL T+P +   +  G L+LHG  Y+
Sbjct:    8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAVLGVGDIVVCGHSDCGAMGAIASCACLDQLPAVAGWLHHAEAARAMNSAHEHASEAARLDALVRH----NVIAQLANLRTHPCVARALEQGRLNLHGWVYD 183          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.038e-20
Identity = 58/190 (30.53%), Postives = 96/190 (50.53%), Query Frame = 3
Query:  114 FKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD-EEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDYDG 680
            F++  F  + + ++ L+ GQ P+ + I C+DSRV P+ I   + G+ F++RN  N++PP  +      AA+E+A+ ++++  I+V GHS CG +  L+ +   +E    +  W+   +  R       S L  +        E++   L NL TYP I  ++  G LSLHG  Y       E   L YDG
Sbjct:   11 FREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAANGGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLNSLQEKLPLVYDWLKHTEATRRLVLDNYSHLEGEDLIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIYRIE----EGEVLAYDG 196          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.788e-20
Identity = 58/181 (32.04%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  108 LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPS--ETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS---FIRSWVLVGKNARLNTK-AASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYY 632
            L F++ ++ E  E Y++L   Q P  + I+C DSRV P+ I G QPGE +++RN+ N++PP  S      T A++E+A+  V V+N+++ GHS CG   ++  + DE   +   +I +W+   +  +   K     S  F  +    E+ +    L NLL+Y +I+E+V    L + G +Y
Sbjct:    8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHY 188          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19
Identity = 49/174 (28.16%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  114 FKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSM-QDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYY 632
            F+   +  + + ++  A GQ P+ + I C+DSR+ P+ I     GE F++RN  N++PP  +      A++E+A+ ++ +E+++V GHS CG +  L+ + Q +ED   +  W+   +  R       S    D        E+V   + NL TYP +  ++  G L + G  Y
Sbjct:   11 FRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAANGGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKLNQLQEDMPLVYDWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIY 184          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 3
Query:  108 LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPS--ETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS---FIRSWVLVGKNARLNTK-AASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYY-----NFVDCTFEKWTLDYDGSNLKESK 701
            L F++ ++ E  E Y++L   Q P  + I+C DSRV P+ I G +PGE +++ N+ N+ PP  S      T A++E+A+  V V+N+++ GHS CG   ++  + DE   +   +I +W+   +  +   K     S  F  +    E+ +    L NLL+Y +I+EK     L + G +Y        +  FE    +  G  +K+ K
Sbjct:    8 LEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNELKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRK 216          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAN_HAEIN (Carbonic anhydrase 2 OS=Haemophilus influenzae GN=can PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17
Identity = 65/216 (30.09%), Postives = 112/216 (51.85%), Query Frame = 3
Query:   87 DKMKHRFL---SFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAG-ALSLHGGYYNFVDCTFEKWTLDYD-GSNLKESKEVAFRN 719
            DK+K  F    S+ ++   EN  +++ LAD Q P ++ I C+DSRV    +   +PGE F+ RNVAN V   +       + +++AV+ +K+E+I++ GH+ CGGIHA M+   ++D   I +W+L  ++           LS + +     K +V   + NL     ++     G  LSLHG  Y+  D     + +D    +  +E+ E+++RN
Sbjct:    2 DKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTD---FNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMA---DKDLGLINNWLLHIRDIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVND----GFLVDQGVMATSRETLEISYRN 207          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.234e-14
Identity = 48/181 (26.52%), Postives = 92/181 (50.83%), Query Frame = 3
Query:  144 EHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPSFIRSWVLVGKNA-RLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSL-HGGYYNFVDCTFEKWTLDYDG 680
            E +  LA GQ+P+++ I C+DSRV  + I+G   GE F+ RN+AN+VP  +     + + + +AV  +KV++I+V GH  CGG+ A ++     D   +  W+   ++  RL+ K   +      + +   + +V  S  +++    +++        + HG  +N  D   +   +D+ G
Sbjct:   38 EFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTID---LSSMSVINYAVGHLKVKHIVVCGHYNCGGVQAALT---PTDLGILNPWLRNIRDVYRLHEKELDAIEDDGERFNRLVELNVIESCRSVIKTAVVQQSYEENGFPIVHGWVFNLKDGLLKDLNIDFPG 212          
The following BLAST results are available for this feature:
BLAST of DY258824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CAH2_FLALI9.962e-4854.49Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CYNT_ECOLI1.449e-2230.51Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO571.449e-2230.51Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_PSEAE3.568e-2133.89Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_SYNY31.038e-2030.53Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_HELPJ8.788e-2032.04Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CYNT_SYNE79.716e-1928.16Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_HELPY1.657e-1829.19Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]
CAN_HAEIN1.403e-1730.09Carbonic anhydrase 2 OS=Haemophilus influenzae GN=... [more]
CAN_EMENI3.234e-1426.52Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258824 ID=DY258824; Name=DY258824; organism=Citrus clementina; type=EST; length=899bp
GGAGACATTCTGAGGGAATCACTCAAGAATTTCAAGTTGACAAGCTGGAG
ACTGCAGCAGAAGTTGAAAATGAATGTGATTTTTTTGATAAGATGAAACA
TCGCTTTTTGAGCTTCAAAAAACAGAAATTCATGGAAAATTTAGAGCATT
ACCAAAATCTTGCGGATGGTCAAGCACCAAAGTTTATGGTGATTGCTTGT
GCGGACTCTAGAGTTTGTCCCTCAAACATCCTGGGATTTCAACCAGGAGA
GGCATTTATTGTCCGCAATGTTGCAAATATGGTGCCCCCGTGTGAGAGTG
GGCCCTCAGAAACAAATGCTGCACTGGAATTTGCCGTTAATTCTGTTAAA
GTTGAAAACATTTTAGTCATTGGCCACAGCCGCTGTGGAGGCATTCATGC
CCTTATGAGCATGCAGGATGAAGAAGATCCAAGTTTTATTAGAAGTTGGG
TTCTTGTGGGGAAGAATGCAAGGTTAAACACAAAAGCTGCTTCTTCCAGC
CTTAGCTTTGACCATCAGTGTTCACACTGTGAGAAGGAATCTGTAAATTG
TTCATTGTTAAACCTGCTCACTTATCCATGGATAGAAGAAAAAGTTAGGG
CAGGTGCTCTGTCTCTTCATGGTGGCTACTATAACTTCGTTGACTGCACA
TTTGAGAAATGGACCCTGGATTATGATGGGAGCAATTTGAAGGAAAGTAA
AGAGGTTGCATTTAGAAACCGTTCCTTTTGGAGCTGATTTCCACTTGCAT
CATCTCCATGAAATAAGTTTCTTTTCTTTTTTCTCTTCTATTGTATGTGA
TTTATTTCATAATGTCGGACAAATGAAAAATAATGTTATCCCCTTCCAAG
GGGAATACCTATGCTGTTGTATCTTAATAGCTTAAAAAATTAGTTTGTC
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