DY258826

Overview
NameDY258826
Unique NameDY258826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.036e-56
Identity = 112/225 (49.78%), Postives = 147/225 (65.33%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S +LLH  AHNPTG+DP PE+W++IA    K   ++ F M
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.036e-56
Identity = 112/225 (49.78%), Postives = 147/225 (65.33%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S +LLH  AHNPTG+DP PE+W++IA    K   ++ F M
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_RAT (Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.534e-55
Identity = 111/225 (49.33%), Postives = 148/225 (65.78%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S +LLH  AHNPTG+DP PE+W+++A    K+  ++ F M
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAGKNLDKEYLPIGGLADFCKASAELALGENSEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEMAAVVKKKNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_HORSE (Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.616e-55
Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 1
Query:  199 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            V M PPDPILGV+EA+K DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++  LK  R  TVQ +SGTG+LR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D+ G + DI   P  S ILLH  AHNPTG+DP PE+W++IA    K   ++ F M
Sbjct:    7 VEMGPPDPILGVTEAYKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEALKSGRYVTVQSISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGLQLHAYRYYDPKTCGFDVTGALEDISKIPQQSIILLHACAHNPTGVDPRPEQWKEIATLVKKNNLFAFFDM 215          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 5.827e-55
Identity = 105/199 (52.76%), Postives = 140/199 (70.35%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAEN-LMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S F  V  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VLDVV+KAE  L+ +    KEY+PI G++ FNK++A+L+ GAD+  + E RV TVQ LSGTGSLR+ A  ++ ++  + + I  PTWGNH  +FN A +    +RYYDP T GLD +G++ D+ AAP G+ +LLH  AHNPTG+DPT E+WE+I
Sbjct:    3 SVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHACAHNPTGVDPTSEQWEQI 201          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 2.892e-54
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 1
Query:  199 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  + YVL+ V+KAE ++  +  +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT  LD  G + DI   P  S ILLH  AHNPTG+DP  E+W+++A    K    ++F M
Sbjct:   29 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKSYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDM 237          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 4.933e-54
Identity = 114/217 (52.53%), Postives = 144/217 (66.36%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPMLPTRY 837
            F  V + P DPILGVS AFKADTD +K++  VGAYR E  +PYVL  V +AE  +L  G  KEYLPI+G+  FNK++A+LL+G D  V KE+R+ TVQ LSGTG+LR+    I +Y P G  V IS P+W NH NI  ++ V  +EY YYDPKT GLD  GMI D++AAP GS  +LH  AHNPTG+DPT E+W  IA      +  +H P +   Y
Sbjct:   41 FANVPLGPVDPILGVSTAFKADTDPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLL--GAPKEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLCAHNPTGVDPTHEQWNIIA---DVMREKNHIPFMDCAY 251          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 4.176e-53
Identity = 102/199 (51.26%), Postives = 138/199 (69.35%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VV+KAE  ++ +R   KEYLPI GL  FNK++A+L+ GAD+  ++E R+ TV+ LSGTGSLR+    + +++    + I+ PTWGNH  IF  A +    YRYYDP T GL+ +G++ D+ AA  GS +LLH  AHNPTG+DPT ++WE+I
Sbjct:   47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQQWEQI 245          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_XENTR (Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.993e-51
Identity = 99/195 (50.77%), Postives = 131/195 (67.18%), Query Frame = 1
Query:  199 VTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F + +A+L  G +   ++  R  TVQ +SGTGSLR+ A  ++R++  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S IL H  AHNPTG+DP  E+W+++A
Sbjct:   33 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLSSVRKAEAQLASKNLDKEYLPIGGLAEFARASAQLALGENCDAIQSGRFITVQTISGTGSLRVGANFLQRFYKYSRDVYLPKPSWGNHTPIFRDAGLEVKGYRYYDPKTCGFDFTGALDDISKIPEQSIILFHACAHNPTGVDPKQEQWKELA 227          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_SCHPO (Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=aat1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 8.708e-51
Identity = 102/244 (41.80%), Postives = 151/244 (61.89%), Query Frame = 1
Query:  115 NSTAGFIKTKSFGRVSMVAAVNVSRFE---GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPMLPTRY 837
            N+ A      S+  V  +A+ +   F+    V M PPDPI G++EA+K D D KK+NLG G YR +  +PYVL  V++AE  +L +  +KEY PI G+ +F     +L +G     +K+ R+ + Q +SGTG+L +AA  +  ++P   + +S PTWGNHKN+F+ A +    Y+YYDP T GLD++GM++D+ +AP GS ILLH  AHNPTG+DPT  +W+ I     K+   +HF +L   Y
Sbjct:   12 NTFASLKTNVSYHGVKCLASQSKRGFKVWADVPMGPPDPIFGITEAYKKDGDVKKMNLGAGTYRDDAGKPYVLPSVRQAETELLSQKLDKEYAPITGIPSFRVQATKLAYGDVYESIKD-RLVSAQSISGTGALCIAANFLASFYPSKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGLDIKGMLSDLTSAPDGSIILLHACAHNPTGVDPTKAQWDDILKTMQKK---NHFALLDMAY 251          
The following BLAST results are available for this feature:
BLAST of DY258826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AATM_PONAB4.036e-5649.78Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA4.036e-5649.78Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AATM_RAT1.534e-5549.33Aspartate aminotransferase, mitochondrial OS=Rattu... [more]
AATM_HORSE2.616e-5551.67Aspartate aminotransferase, mitochondrial OS=Equus... [more]
AAT2_ARATH5.827e-5552.76Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AATM_CHICK2.892e-5450.72Aspartate aminotransferase, mitochondrial OS=Gallu... [more]
AATC_DICDI4.933e-5452.53Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AAT3_ARATH4.176e-5351.26Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_XENTR2.993e-5150.77Aspartate aminotransferase, mitochondrial OS=Xenop... [more]
AATM_SCHPO8.708e-5141.80Aspartate aminotransferase, mitochondrial OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258826 ID=DY258826; Name=DY258826; organism=Citrus clementina; type=EST; length=1215bp
CGTAAAATCACATTTATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAATACCGCTACTATGATCCAAAAACAGC
GGGTTTGGATTTAGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGAG
GATCTTTTATTCTGCTTCATGGTTGGGCTCACAACCCAACTGGCATTGAT
CCAACCCCTGAAAAATGGGAAAAAATTGCTTGAGGCCATCCAAAAGAAAA
ATCATATTCCCATTTTCCGATGTTGCCCACCAGGTATGATTTCCTGGAAA
TCAAGAAAAAAAAATGAGGCCCACAAAGTCCTTCCCAACCCGGCCCCAAA
AGGAAGTTTAAAAAAATTTCAAAATTTCTTCCCGGAAAATTCAACTCTTT
GGAGGGCCCCCCCCCCAAAAAAAAAAAAAACCTTTTGAAGGAACCCTCGG
GAAATTTGACAGGGGGAACACCCCTGGACAAAGGAAGCATCCCCCCCCGG
GAAAAAGGGTTTGCCCCCCCCCGGGGCCAAGGGAACATCCCCGGGGGTCG
CCCACCCCCACCCACCAAAAAAAACCCTTGGGTCCCTCTTAATCGCAAAA
AAAGGAATGGGGAAGACAACAAAAAATGGGGGGGGCTGCTTGGTCTTCTC
CACATAAACCCAAAA
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