DY258826

Overview
NameDY258826
Unique NameDY258826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT1_ARATH (Aspartate aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=ASP1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 5.644e-50
Identity = 100/213 (46.95%), Postives = 140/213 (65.73%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            S ++ V  AP DPILGV+EAF AD   +K+N+GVGAYR +  +P VL+ V++AE   L      EYLP+ G A    +T +L +G ++  +K++R+A VQ LSGTG+ RL A   +R+ PG+++ I  PTW NH NI+ DA+VP   Y YY P+T GLD   ++ D+K AP GSF LLH  AHNPTG+DPT E+W +I+     +K ++ F M
Sbjct:   31 SWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEK-RLAGSTFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLLHACAHNPTGVDPTEEQWREISQLFKAKKHFAFFDM 242          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT_HAEIN (Aspartate aminotransferase OS=Haemophilus influenzae GN=aspC PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.145e-49
Identity = 93/197 (47.21%), Postives = 129/197 (65.48%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            FE +  AP DPILG+ EAFK++T E K+NLG+G Y+  +    ++  VK+AE  + ++ + K YL I+G+A +N+ T  LLFG D+ V++  R  TVQ L GTG+LR+AA  I+R      V IS+PTW NH  IFN   +   EYRYYD +   LD E ++ D+  A  G  +LLHG  HNPTGIDPTPE+W+++A
Sbjct:    2 FEHIKAAPADPILGLGEAFKSETRENKINLGIGVYKDAQGTTPIMHAVKEAEKRLFDKEKTKNYLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSLGGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELA 198          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 2.371e-48
Identity = 98/198 (49.49%), Postives = 128/198 (64.65%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S    V  AP DP+L V  A + D    KLNL  G YRTEE +P VLDVV++AE   L    +KEYLP+ GL  FNK++ +L+ G D+  LKE RV T Q LSGTGSLR+ A  +  +   + + + +PTWGNH  IF  A +    +RYYDPK+ GLD +GM+ D+ AAP G+ ++L   AHNPTG+DPT E+WEKI
Sbjct:    3 SILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQ-QLANDLDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQACAHNPTGVDPTFEQWEKI 199          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT_SALTI (Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 3.205e-45
Identity = 88/197 (44.67%), Postives = 125/197 (63.45%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +  P  +V +S+P+W NHK++FN A +   EY YYD +   LD E + A +  A  G  +L HG  HNPTGIDPT E+W+ +A
Sbjct:    2 FENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLA 198          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 3.831e-45
Identity = 94/206 (45.63%), Postives = 130/206 (63.11%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-----AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  APP  +  ++  F+ D D +K+NLGVGAYRT+E QP+VL VV+K E L+   G  N EYLPI GL  F    + +  G D+  + ++RV +VQGL GTG+LR+ A  + R++ G       V +SSPTW NH ++F DA       YRY+D    GLDL+G++ D++ AP  S  +LH  AHNPTG DPTP++W++IA
Sbjct:    4 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIA 209          

HSP 2 Score: 22.7126 bits (47), Expect = 3.831e-45
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  792 KRKIIFPFSDVAHQV*FPGNQEK 860
            KR+ +FPF D A+Q    G+ +K
Sbjct:  213 KRRCLFPFFDSAYQGFASGSLDK 235          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT_SALTY (Aspartate aminotransferase OS=Salmonella typhimurium GN=aspC PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 5.467e-45
Identity = 88/197 (44.67%), Postives = 125/197 (63.45%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +  P  +V +S+P+W NHK++FN A +   EY YYD +   LD E + A +  A  G  +L HG  HNPTGIDPT E+W+ +A
Sbjct:    2 FENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHTLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLA 198          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT_ECOLI (Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.713e-44
Identity = 86/197 (43.65%), Postives = 124/197 (62.94%), Query Frame = 1
Query:  190 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            FE +T AP DPILG+++ F+AD    K+NLG+G Y+ E  +  VL  VKKAE  +LE    K YL I+G+  F + T ELLFG  ++++ ++R  T Q   GTG+LR+AA  + +     +V +S+P+W NHK++FN A +   EY YYD +   LD + +I  +  A  G  +L HG  HNPTGIDPT E+W+ +A
Sbjct:    2 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_PIG (Aspartate aminotransferase, cytoplasmic OS=Sus scrofa GN=GOT1 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 3.186e-44
Identity = 93/206 (45.15%), Postives = 125/206 (60.68%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  +   F+ D D +K+NLGVGAYRT++ QP+VL VV+K E  +      N EYLPI GLA F    + L  G D+  L+E+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F  A       YRY+D +  GLDL+G ++D++ AP  S  +LH  AHNPTG DPTPE+W++IA
Sbjct:    5 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANDSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIA 210          

HSP 2 Score: 26.1794 bits (56), Expect = 3.186e-44
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  792 KRKIIFPFSDVAHQV*FPGNQEK 860
            KR+ +FPF D A+Q    GN EK
Sbjct:  214 KRRFLFPFFDSAYQGFASGNLEK 236          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT_PSEAE (Aspartate aminotransferase OS=Pseudomonas aeruginosa GN=aspC PE=3 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 4.628e-44
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 1
Query:  181 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPMLPTRY 837
            +S F  V MAP DPILG++EAF ADT   K+NLGVG Y  EE +  +L  V+ AE   +E    + YLPIEG+AA+++   +LLFG ++ +L   RV T Q + GTG+L+L A  ++R  P A V IS P+W NH+ +F  A  P   YRYYD  + G++  G++ D+ A P  S ++LH   HNPTG+D   + W+++       K+  H P L   Y
Sbjct:    1 MSLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGRIPLLRAVQAAEKARIEAHAPRGYLPIEGIAAYDQGVQKLLFGNESELLAAGRVVTTQAVGGTGALKLGADFLKRLLPDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAGLLEDLNALPARSIVVLHACCHNPTGVDLELDDWKQVL---DVLKAKGHVPFLDIAY 216          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_PANTR (Aspartate aminotransferase, cytoplasmic OS=Pan troglodytes GN=GOT1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 7.894e-44
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-----VLISSPTWGNHKNIFNDARVP-WSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S F  V  A P  +  ++  F+ D D +K+NLGVGAYRT++  P+VL VVKK E  +  +   N EYLPI GLA F    + L  G D+  LKE+RV  VQ L GTG+LR+ A  + R++ G       V +SSPTW NH  +F+ A       YRY+D +  GLDL+G + D++ AP  S ++LH  AHNPTGIDPTPE+W++IA
Sbjct:    5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIA 210          
The following BLAST results are available for this feature:
BLAST of DY258826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AAT1_ARATH5.644e-5046.95Aspartate aminotransferase, mitochondrial OS=Arabi... [more]
AAT_HAEIN2.145e-4947.21Aspartate aminotransferase OS=Haemophilus influenz... [more]
AAT4_ARATH2.371e-4849.49Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AAT_SALTI3.205e-4544.67Aspartate aminotransferase OS=Salmonella typhi GN=... [more]
AATC_CHICK3.831e-4545.63Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AAT_SALTY5.467e-4544.67Aspartate aminotransferase OS=Salmonella typhimuri... [more]
AAT_ECOLI2.713e-4443.65Aspartate aminotransferase OS=Escherichia coli (st... [more]
AATC_PIG3.186e-4445.15Aspartate aminotransferase, cytoplasmic OS=Sus scr... [more]
AAT_PSEAE4.628e-4442.01Aspartate aminotransferase OS=Pseudomonas aerugino... [more]
AATC_PANTR7.894e-4446.12Aspartate aminotransferase, cytoplasmic OS=Pan tro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258826 ID=DY258826; Name=DY258826; organism=Citrus clementina; type=EST; length=1215bp
CGTAAAATCACATTTATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAATACCGCTACTATGATCCAAAAACAGC
GGGTTTGGATTTAGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGAG
GATCTTTTATTCTGCTTCATGGTTGGGCTCACAACCCAACTGGCATTGAT
CCAACCCCTGAAAAATGGGAAAAAATTGCTTGAGGCCATCCAAAAGAAAA
ATCATATTCCCATTTTCCGATGTTGCCCACCAGGTATGATTTCCTGGAAA
TCAAGAAAAAAAAATGAGGCCCACAAAGTCCTTCCCAACCCGGCCCCAAA
AGGAAGTTTAAAAAAATTTCAAAATTTCTTCCCGGAAAATTCAACTCTTT
GGAGGGCCCCCCCCCCAAAAAAAAAAAAAACCTTTTGAAGGAACCCTCGG
GAAATTTGACAGGGGGAACACCCCTGGACAAAGGAAGCATCCCCCCCCGG
GAAAAAGGGTTTGCCCCCCCCCGGGGCCAAGGGAACATCCCCGGGGGTCG
CCCACCCCCACCCACCAAAAAAAACCCTTGGGTCCCTCTTAATCGCAAAA
AAAGGAATGGGGAAGACAACAAAAAATGGGGGGGGCTGCTTGGTCTTCTC
CACATAAACCCAAAA
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