DY258827

Overview
NameDY258827
Unique NameDY258827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1063
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: YBB2_SCHPO (Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.852e-22
Identity = 75/267 (28.09%), Postives = 122/267 (45.69%), Query Frame = 1
Query:   19 DEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI-------------ELRPT--------SIEKEVFPKIALEGK--LFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSF-KLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN---------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            ++ S +G +V E STG+V  +V+KP  ++ N I+ GIY+ + ++ D I             +LR          S+E +V   +  +    ++A   P FW  I      +    LYL       +  K  T A I+  V +H +A + +G  IGP+V++G    +E G R+    +     I  +A +  SI+  H  +G+W+RVE                      +T++G D  V DE+     +VLPHKEIK  ++  EIVM
Sbjct:  149 EDASNFGCLVEEPSTGRVLHYVDKPSSYLSNIISCGIYIFDASIFDEIKKAYERRLEEVEKQLRSLDEGMEDYLSLETDVLAPLCSDSSKAIYAYNTPEFWRQIKTAGSAVPANSLYLQKAYHDGTLPKPDTEAEIIQPVFIHPNAIVSKGAKIGPNVSIGARVRIEDGARIRNSIIQEDCEISANAVVLHSILSRHCKIGKWSRVEGSPTLPSQHSTTIMRNSVKVQAITVMGADCIVHDEVRVQNCLVLPHKEIKVGLV-GEIVM 414          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: MPG1_SULAC (Putative mannose-1-phosphate guanyltransferase OS=Sulfolobus acidocaldarius GN=mpg1 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.264e-20
Identity = 68/230 (29.57%), Postives = 123/230 (53.48%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMV-LPGFWMDIGQPRDYITGLRLYLDSLRKK-------SSFKLATGANIVGNVLVHESAQIGEG-----CLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN-GGVVLPHKEIKSSI 663
            V++PS+YGV++ +    ++ + +EKPK  + N +NAGIY+    +L++I+    SI ++  PK+ +     ++    G WMDIG PRDY   +R+ L+ L  K        S K++  A +     + ++  +GEG      +IG +  +G G  VE  +      +M  V +   + I  S+IG   ++G+W RV+   I+G+ V + D+++ N   ++LP KE+  S+
Sbjct:  136 VEDPSRYGVLITDGH--RLIQIIEKPKTPLSNLVNAGIYVFKKELLNKID--GLSISRDFLPKLLVSDTCVSVYPYKGLWMDIGVPRDY---MRINLELLTLKYPKGFISQSAKVSEKAELFPPFYIGDNTTVGEGSSIRNSIIGVNNRIGNGSCVEESI------LMNDVMLGDFSLIKESVIGDEVSLGKWNRVDG-AIIGDGVLIHDQVFINRDTIILPDKEVAESV 351          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GLMU_METMP (Bifunctional protein glmU OS=Methanococcus maripaludis GN=MMP1076 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.330e-12
Identity = 58/203 (28.57%), Postives = 89/203 (43.84%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTSIEKEV-----FPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQ------------IGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRG------VRIKKHACISSSIIGWHSTVG 549
            VD P  +GV+ +     K+   +EKPK      N INAGIY L  +V   +E    S   E+       K+   GKL  + L G+W DIG P D ++    +L+ +  K S K+    +I GNV++ E A             I  G ++GP   V P  V+     +   + ++G       +I   + +  SIIG +   G
Sbjct:  123 VDNPENFGVIELGYDN-KIINLLEKPKKEEITSNLINAGIYKLQNSVFGILENLAPSERGEIELTDALKKLIENGKLHGVELKGYWNDIGHPWDVLSANNHFLNKIISKVSGKIENTVSITGNVIIEEGAVIKPNSVIEGPAIIKSGSIVGPLAYVRPNTVLMKNTFVGNSSEIKGSIIFENTKIPHLSYVGDSIIGANCNFG 324          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GLMU_METM7 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0329 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.871e-12
Identity = 58/203 (28.57%), Postives = 87/203 (42.86%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTSIEKEV-----FPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQ------------IGEGCLIGPDVAVGPGCV------VESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVG 549
            V  P  +GVV +     K+   +EKPK      N INAGIY L   V D +E    S   E+       K+   GKL  + L G+W DIG P D ++    +L+ +  K S K+    +I GNV++ E A             I  G ++GP   + P  V      V +   +    ++   +I   + +  SIIG +   G
Sbjct:  123 VGHPENFGVVELGYDN-KIINLLEKPKKEELPSNLINAGIYKLQNNVFDILENLVPSERGEIELTDALKKLIENGKLHGIELNGYWNDIGHPWDVLSANNRFLNKIISKVSGKIENNVSITGNVIIEEGAVIKPNSVIEGPVIIKSGSIVGPLAYIRPNTVLMENTFVGNSSEIKGSIILENTKIPHLSYVGDSIIGANCNFG 324          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GLMU_METM5 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0513 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.603e-12
Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALE-----GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVV 444
            VD P  +GV+ +     KV   +EKPK      N INAGIY L  +V   +E    S   E+    AL+     GKL  + L G+W DIG P D ++    +L+ +  K S K+    +I GNV++ E A I    +I   V +  G +V
Sbjct:  123 VDNPENFGVIELGYDN-KVINLLEKPKKEELTSNFINAGIYKLQNSVFGILENLVPSERGEIELTDALKKLIEIGKLHGVELNGYWNDIGHPWDVLSANSHFLNKIISKISGKIENNVSITGNVIIEEGAVIKSNSVIEGPVIIKSGSIV 271          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GLMU_META3 (Bifunctional protein glmU OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0642 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.126e-11
Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE-LRPTSIEK----EVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTV-MRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHV-CDEIYSN 621
            VD PS +GV+V++     +E   EKPK    N INAGIY     + D +E LRP+   +    +   ++  E  +  + L G+W DIG+P D +      L +++     K+     I G V++ E  +I    +I     +  G +V     +   TV M    +   + I  SII  +S V   + + + +I+GE+ ++ C+ I +N
Sbjct:  125 VDNPSNFGVIVVDNQNNIIE-LQEKPKNPKSNLINAGIYKFENKIFDILETLRPSERGEVELTDAIKELIKENNIKGIKLNGYWNDIGKPWDLLDANTHILKNIKTDIKGKIGKNVVIEGAVIIEEGTEIKPNTVIEGPAIIKSGAIVGPLAHIRPNTVLMENTGVGNSSEIKGSIIMKNSKVPHLSYIGD-SIIGENCNMGCNTITAN 331          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GLMU_METVS (Bifunctional protein glmU OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0399 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.471e-11
Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPK------LFVGNKINAGIYLLNPAVLDRIELRPTSIEKEV-----FPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQ------------IGEGCLIGPDVAVGPGCV------VESGVRLSRCTVMRGVRIKKHACISSSIIG 531
            VD P  +GV+ +     KV   +EKP        F  N INAGIY L   V + +E    S   E+       K+    KL+ + L G+W DIG+P D ++    +L ++  K S  +     I GNV++ E               I  G  IGP   + P  V      V +   +    +M+  +I   + +  SIIG
Sbjct:  123 VDNPENFGVIELGYDN-KVINLLEKPNEDEIKSKFTSNLINAGIYKLENFVFEILENLLPSERGEIELTDALKKLIESSKLYGIELNGYWNDIGRPWDVLSANNYFLKNIMPKISGNIENNVTITGNVIIEEGVTVKSNSVIEGPVIIKSGAFIGPLAYIRPNTVLMEDTFVGNSSEIKGSIIMKNTKIPHLSYVGDSIIG 322          
The following BLAST results are available for this feature:
BLAST of DY258827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
YBB2_SCHPO1.852e-2228.09Probable mannose-1-phosphate guanyltransferase OS=... [more]
MPG1_SULAC2.264e-2029.57Putative mannose-1-phosphate guanyltransferase OS=... [more]
GLMU_METMP1.330e-1228.57Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METM73.871e-1228.57Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METM56.603e-1234.00Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_META31.126e-1127.75Bifunctional protein glmU OS=Methanococcus aeolicu... [more]
GLMU_METVS1.471e-1127.86Bifunctional protein glmU OS=Methanococcus vanniel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258827 ID=DY258827; Name=DY258827; organism=Citrus clementina; type=EST; length=1063bp
CACTTATCTTGTATTGTGGATGAGCCATCAAAATATGGTGTGGTGGTTAT
GGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTAGAGAAACCTAAATTAT
TTGTTGGTAACAAAATTAATGCTGGAATTTATCTTTTGAACCCTGCGGTT
CTTGATCGCATTGAGCTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCC
AAAAATTGCTTTAGAGGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCT
GGATGGACATTGGACAGCCGAGGGATTACATTACAGGCTTGAGACTCTAT
CTGGACTCCCTGAGGAAGAAGTCCTCATTCAAGTTGGCCACTGGTGCTAA
CATTGTAGGCAATGTCTTGGTGCATGAGAGTGCTCAAATTGGGGAGGGAT
GTTTGATTGGACCCGATGTTGCCGTTGGCCCGGGTTGTGTTGTTGAGTCA
GGAGTTAGACTCTCTCGCTGCACAGTGATGCGTGGAGTGCGCATCAAGAA
ACATGCTTGCATATCCAGCAGTATCATTGGATGGCACTCCACTGTTGGGC
AATGGGCTCGCGTAGAGAACATGACCATTCTCGGGGAAGACGTTCATGTC
TGCGATGAAATTTATAGCAATGGGGGTGTGGTTTTGCCGCACAAAGAGAT
AAAATCAAGCATTTTGAAGCCAGAGATAGTCATGTGAGCCACTGATCAGA
TTGCAAGTAGAGAATGTGGTCGGAGAGTAGCAAGTTATCCAGTCATTGTG
CCCGGTAATGTGTTCTTTATCCTTTCTTCATCTTCTTTACATTGTAAAAC
TGTGTGTGTTTTAGTCTTTTGAGTCGTGTGAATTCTAAAGTTGAAGGCTT
TTTTAGTTTCTCTTGTAAAATGCTCAAAATTATCATTGGGTGTGGGAAAT
GGAAATTGTAACTTTTAGTGTAAATAAAGATTTGGCAAAAAACCATCGGG
GTGGGTTTCCGGGGCCAGTAATTGGTCATGATGTCCCGAAAAAATGGCTT
TTATTTTTTGAAATATAAAAAATTTTTTTTTTCCCACTTTTACCAAATTT
CAATTGGCCCGGG
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