DY258829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258829 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19 Identity = 50/185 (27.03%), Postives = 86/185 (46.49%), Query Frame = 3 Query: 195 QKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSCFL 749 ++ VH + G AD+++W+N++ +L T +W LFE Y F V +L ++ F W + LFNR ++P + E + + +N L + ++I G KQ +G+ NFLT+LY+G V + +P LYE+++D +D Y+K+D L Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLL 186
BLAST of DY258829 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17 Identity = 47/168 (27.98%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 177 NRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEV 680 ++LF R + +H +LGGG ADV+LWR K +S ++ A W++FE Y T++ L+L + F W + + NR +P F + + + +VN+ L + DIA + IGS +F T+ + + T+P YE++ED + Sbjct: 6 DKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
BLAST of DY258829 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.004e-17 Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 204 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVD 683 VH LG G AD+LLWRN+ + +L+ +T W LFE Y+ L+ V L+L + F W + + NR VP +P E + +N L + DI + +G+ N LT++YIG + + + P++YEK++D +D Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
BLAST of DY258829 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.936e-16 Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 3 Query: 192 RQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFW--VNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEV 680 R++ ++H LGGG+ AD++ W+NKK S ++L T IW LFE + Y F+T +C L+L + W + S L P + + + + +N + L DI+ G + +G+ + LT+LYI FV T+P+LYE++E+E+ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDL----RISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEEL 178
BLAST of DY258829 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 7.376e-12 Identity = 47/161 (29.19%), Postives = 76/161 (47.20%), Query Frame = 3 Query: 204 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDS 686 V +LG G AD+ LW++K S L+ AT W L E++ + ++C L+L ML F W +F P + P+ + + + + L +L +IA G K IGS + LT+LYI V + T+PV+Y + ++ +DS Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPD---SPLKALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDS 161 The following BLAST results are available for this feature:
BLAST of DY258829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258829 ID=DY258829; Name=DY258829; organism=Citrus clementina; type=EST; length=956bpback to top |