DY258830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.496e-32 Identity = 90/279 (32.26%), Postives = 136/279 (48.75%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 LIQA + RP GPP +RITGI L + +RL + A++ ++PF+FNSV + + L V+ GEALA++ LH + D+ S D L + LSPK++ + EQ+SN N R +E + YAA+F+ ++ ++ R +R+ VE+ ++ NIIACEG +R ERHE L KW RF +A F PLS + LL++Y+ D YR+ E + + + W R L + AW Sbjct: 244 LIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHM--PDESVST------------------------------ENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.963e-32 Identity = 87/279 (31.18%), Postives = 139/279 (49.82%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 LI+AL RP GPP++RITGI + L+ + RL + AE +PF+F+ ++ +KL V+ GEALA++ L LH + + ++N D L + LSP ++ + EQ++N N + R +E + Y A+F+ ++ ++R ER+ VE+ E+ N+IACEG ER+ERHE L KW RF +A F PLS + LL+SY+ + Y + E + + + W ++PL + AW Sbjct: 351 LIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDES-----VTVENH---------------------------RDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS-EKYTLEERDGALYLGWKNQPLITSCAW 596
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 7.788e-32 Identity = 92/279 (32.97%), Postives = 137/279 (49.10%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGI------HPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 LIQAL+ RP GPP +RITGI + + E LD + L +E+ IP +F + + + L ++ GEAL+++ LQLH S+ N D L + GLSPK+ + EQ+S+ N + R E + Y+A+F+ +++++ R + ER+ VE+ ++I NIIACEG +R ERHE L KW R +A F PLS R+LL Y+ D Y + E + +L+ W R L S SAW Sbjct: 325 LIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHH-----------TPDESVDVNN---------------------PRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYS-DKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.266e-31 Identity = 91/281 (32.38%), Postives = 140/281 (49.82%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTGE--ALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYN-CDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QAL+ R GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD L ++ E A+A++SV +LH LL ++ L + + P I V EQ+S+HNG ++R E+L+ Y+ LFD LE S S +++ E L G++I N++ACEG +R ERHE L +W RF + F L A LL +N +GYR+ E+N C+++ WH RPL + SAW Sbjct: 332 LMQALALREGGPPVFRLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKLLGRT------------------------------------GGIEKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPS--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.960e-31 Identity = 93/279 (33.33%), Postives = 134/279 (48.03%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQKEV------LDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QAL+ RP GPP +RITGI L+ + RL+ A +PF+F+ + ++ L V GEALA++ L+LH + D+ S AN D L + LSPK++ + E +SN N +R E L Y A+F+ ++ ++ R ER+ +E+ EI N+IACEG ER ER+E KW R +A F PLS R LLQSY+ D Y++AE + + + W RPL SAW Sbjct: 298 LLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHI--PDESVST--------AN----------------------HRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYS-DNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.048e-31 Identity = 87/285 (30.53%), Postives = 139/285 (48.77%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTGE--ALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNC-DGYRIAEDNRCVLICWHDRPLFSVSAWSCRN 831 L+QAL+ RP GPP R+TGI P + L + +L + E +++ F++ V + L +LD L ++ E ++ ++SV +LH LLA ++ ++ + + P+IM V EQ++NHNG M+R E+L+ Y+ LFD LESS + + + +M G++I N++ACEG +R E HE L +W R + F + L A LL + +GYR+ E+N + + WH RPL SAW N Sbjct: 335 LLQALALRPSGPPAFRLTGIGPPAPDNSDYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARP------------------------------------GAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNN---QDKMMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAWKLGN 580
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.125e-30 Identity = 90/281 (32.03%), Postives = 137/281 (48.75%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHP----QKEVLDQMAHRLTEEAEKLDIPFQFNS-VVSKLENLDFDKLRVKTG--EALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNC-DGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QAL+ R GPP R+TGI P + L ++ +L + AE + + F++ V + L +LD L ++ EA+A++SV +LH LL ++ L + + P I V EQ+SNHNG ++R E+L+ Y+ LFD LE + S +++ E L G++I N++ACEG +R ERHE L +W RF + L A LL +N GYR+ E N C+++ WH RPL + SAW Sbjct: 339 LMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRP------------------------------------GGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPN--SQDKVMSEVYL-GKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.125e-30 Identity = 89/281 (31.67%), Postives = 138/281 (49.11%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQK----EVLDQMAHRLTEEAEKLDIPFQFNSVVSK-LENLDFDKLRVKTGE--ALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYN-CDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QAL+ RP GPP R+TGI P + L ++ +L AE + + F++ V+ L +LD L ++ E ++A++SV +LH LL +D L + + P+I V EQ+SNHN ++R E+L+ Y+ LFD LE S +++ E L G++I N++AC+G +R ERHE L +W RF A F + A LL +N +GYR+ E + C+++ WH RPL + SAW Sbjct: 287 LMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRP------------------------------------GAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPS--GQDKVMSEVYL-GKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.918e-30 Identity = 86/278 (30.94%), Postives = 141/278 (50.72%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIH--PQKEVLDQMAHRLTEEAEKLDIPFQFNSVVS-KLENLDFDKLRVKT-GEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQ-SYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QAL+ RP GPP R+TG+ +E + ++ +L + A+ + + F+FN + + +L +L+ D +T E L ++SV +LH +L+ ++ L ++ + P ++ V EQ++NHNG ++R EAL+ Y++LFD LE V S +R+ E L G +I N++A EG +R ERHE L +W +R A F V L A LL S DGYR+ E++ +++ W +PL + SAW Sbjct: 275 LMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQP------------------------------------GSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYL-GRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAW 515
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.770e-29 Identity = 87/279 (31.18%), Postives = 136/279 (48.75%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSL--LAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAWSCRN 831 L L++RP GPPH+R+TG+ E L RL++ A+KL +PF+F + K+ NLD ++L V+ EA+A+ + HSL + D +L L+ L+PK++ V EQD +H G + + R +EA++ Y+ALFD L +S S ER VE+ L +EI+N++A G R K E W ++ F + L+ A LL + DGY + +DN + + W D L + SAW+ R+ Sbjct: 417 LFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQ--HSLYDVTGSDAHTLWLLQR--------------------------------------LAPKVVTVVEQDLSHAG-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTPRS 653 The following BLAST results are available for this feature:
BLAST of DY258830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258830 ID=DY258830; Name=DY258830; organism=Citrus clementina; type=EST; length=1089bpback to top |