DY258830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.901e-18 Identity = 66/269 (24.54%), Postives = 122/269 (45.35%), Query Frame = 1 Query: 31 GPPHLRITGIH-PQK-----EVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 G P +RITGI PQ + +++ RL A+ +PF++ ++ K + + + L + E ++ + + +L D+ + + + D+ LN + ++P + V + +N + R EAL+ ++++FD LE+ V R ER+ +E +FG E N+IACEG+ER ER E ++W R + VP M + + ++ + I +DNR +L W R + ++S W Sbjct: 476 GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENL--HDESVKVESCR------------------------------DTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVW 712
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.360e-18 Identity = 73/275 (26.55%), Postives = 119/275 (43.27%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVVSKLENL-DFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHN-GLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L L++RP +RITG ++L RL + A L++PF+F+ + + NL D +L + GEA+ + + + ++ +L L+ L P ++ V EQ+ +++ G + + R +EAL+ Y+ALFD L + S ER VE+++ G EI+NI+A G RK KW + F V L A LL +GY + E+N + + W D L + SAW Sbjct: 168 LFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRR--------------------------------------LKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRRKRM-----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAW 399
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.689e-16 Identity = 77/290 (26.55%), Postives = 127/290 (43.79%), Query Frame = 1 Query: 1 LIQALSTRPEGP------PHLRITGIHPQ----------KEVLDQMAHRLTEEAEKLDIPFQFNSVVS-KLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L++ LSTR G P ++IT + +E L + L++ ++L I FN V S +L +L+ + L E LA++ +L+ + + +N D L + GL P+++ + EQ+ N N + R+ E+ Y AL + +ES+V T+ +R KVE+ + G ++ N +ACEG +R ER E KW R +A F +PLS + + + + G+ + EDN V W R L SAW Sbjct: 384 LLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDES-----VCTENP---------------------------RDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSE-KIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAW 639
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: MOC_ORYSJ (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.277e-15 Identity = 78/284 (27.46%), Postives = 124/284 (43.66%), Query Frame = 1 Query: 1 LIQALSTRPE---GPPHLRITGIHPQKEVLDQMAHRLTEEAEKLDIPFQFNSVV-SKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGL------TLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQ-SYNCDGYRIAEDNRCVLICWHDRPLFSVSAW 819 L+QA++ R + GPP +R+TG ++ L + +RL A + +PF F ++ S TG A A S+ L D +L L N G+ ++ +FL + +SP ++ + E+++ G L R+ A+ Y+A+F+ LE++V S ERL VE+ + G EI+ + G +E+W A F PLS + AR LL+ Y +GY + E + W RPL SVSAW Sbjct: 174 LLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPD-ETLAVNCVMFLHNLAGHD-----------------ELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSG---GRWWRGIERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436
BLAST of DY258830 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.476e-14 Identity = 77/286 (26.92%), Postives = 117/286 (40.91%), Query Frame = 1 Query: 1 LIQALSTRPEGPPHLRITGI------HPQKEVLDQMAHRLTEEAEKLDIPFQFNSV-VSKLENLDFDKLRVKTGEALAISSVLQLHSLLAADDYASLIALKNSLLANGYGYXXXXXXXXXXXXXXXXXAKMDSFLNSLWGLSPKIMVVTEQDSNHNGLTLMERLLEALYSYAALFDCLESSVSRTSMERLKVEKMLFGEEIKNIIACEGFERKERHEKLEKWIQRFDLACFGNVPLSYCGMLXARRLLQSYNCDGYRIAE----DNRCVLICWHDRPLFSVSAWSC 825 LIQ+L++ GP HLRIT + + + RLT A L PF F+ + E L++ GEAL + +L L L + SFLN L+PK++ + E++ +ER +++L+ Y+A+FD LE+ + R VE++ FG I + R E+ W + F VP+S+ A+ LL +N DGYR+ E N+ VL W R L S S W+C Sbjct: 256 LIQSLASNNNGP-HLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHL-----------------------------------SYRAPESVASFLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARTLVERVFFGPRIAGSLG--RIYRTGGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFN-DGYRVEEVGVGSNKLVL-DWKSRRLLSASLWTC 501 The following BLAST results are available for this feature:
BLAST of DY258830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258830 ID=DY258830; Name=DY258830; organism=Citrus clementina; type=EST; length=1089bpback to top |