DY258836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 2.424e-19 Identity = 41/66 (62.12%), Postives = 55/66 (83.33%), Query Frame = 3 Query: 300 SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 ++V K GSVGRS+D++R+ Y+ELR +L +MFGIEG+ EDP S W+LV+VD END+LL+GDDPWE Sbjct: 1040 TKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWE 1105
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.052e-19 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 300 SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 ++V K GSVGRS+DI+R+ Y+ELR +L MFGI+G+ EDP R W+LV+VD END+LL+GDDPWE Sbjct: 943 TKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWE 1008
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.052e-19 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 300 SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 ++V K GSVGRS+DI+R+ Y+ELR +L MFGI+G+ EDP R W+LV+VD END+LL+GDDPWE Sbjct: 943 TKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWE 1008
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.571e-18 Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 3 Query: 300 SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 ++VYK G+VGRS+DI R+S Y EL+ L +MFGIEG+ ED R GW+LV+ D E+D+LLLGDDPWE Sbjct: 1012 TKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWE 1077
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 4.571e-18 Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 66 IRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 I + + Q S++ S SF A+ +S + +++ +P N S AGP+ R + ++V+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+ D R GW+LV+ D E DVLL+GDDPWE Sbjct: 944 ISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSR-----------SAAGPAHQRMR----------TYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWE 1066
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.737e-17 Identity = 39/66 (59.09%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 300 SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 ++VYK G+VGRS+D+S+FS Y+EL+ L +MF IEG+ E+ R GW+LV+ D E+D+LLLGDDPWE Sbjct: 1030 TKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWE 1095
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.870e-17 Identity = 63/183 (34.43%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 84 LQRQQSNLPSPS--FSKANFMDSSTEISVSIS------------------PM-----------------QNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEP--------SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 LQ SNLPS S F + +F + S S ++S PM ++ + SLPE ++ + G S + SL +P ++V K GSVGRS+D++ F +Y+ELR + MFG++GK E P S W+LV+VD ENDVLL+GDDPWE Sbjct: 743 LQHDGSNLPSTSNSFVQMSFSEESASQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPE-----IHTNSMGTSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWE 920
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 3.870e-17 Identity = 63/183 (34.43%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 84 LQRQQSNLPSPS--FSKANFMDSSTEISVSIS------------------PM-----------------QNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEP--------SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 LQ SNLPS S F + +F + S S ++S PM ++ + SLPE ++ + G S + SL +P ++V K GSVGRS+D++ F +Y+ELR + MFG++GK E P S W+LV+VD ENDVLL+GDDPWE Sbjct: 743 LQHDGSNLPSTSNSFVQMSFSEESASQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPE-----IHTNSMGTSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWE 920
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 5.588e-16 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 225 NFSGAGPSMLRQQFP-----QQSLGSKYEP---------SQVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 497 N G G S F Q S GS ++ ++V K+GSVGRS+D++ F Y EL+ + MFG+EG P SGW+LV+VD E+DVLL+GDDPWE Sbjct: 757 NSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWE 861
BLAST of DY258836 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.895e-12 Identity = 37/91 (40.66%), Postives = 61/91 (67.03%), Query Frame = 3 Query: 267 PQQSLGSKYEPSQVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE*VTVMIFQIFYST 536 PQ S SK ++V+K GS VGR++D+SR + Y++L EL ++F +EG DP GW++++ D END++++GDDPW ++++I T Sbjct: 659 PQSS--SKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDP-EKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYT 746 The following BLAST results are available for this feature:
BLAST of DY258836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258836 ID=DY258836; Name=DY258836; organism=Citrus clementina; type=EST; length=1266bpback to top |