DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.556e-49
Identity = 99/210 (47.14%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR 759
            L+++RR +HE+PEL F+E  T+  IRR L++  I     P  KTG++A+I G    PV+A+RAD+DALP+QE       SK+DG MHACGHD HT  ++G A LL+QR+ +L+GTVR +FQPAEE  AGA  +++ G L    AIFGMH    +P G+I    GP +A+   F + ++G+GGHA +P+++IDPI  A  +I  LQ ++SR
Sbjct:   10 LINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSIDPIAAAGQIISGLQSVVSR 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 3.575e-43
Identity = 100/232 (43.10%), Postives = 138/232 (59.48%), Query Frame = 1
Query:   88 ILTNQVMISAQQDK--DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            I T Q  I+ Q D   + +V +RR  H  PEL F+E  T+A I    + LG+P    V   G++A I GS   P VALRAD DALP+Q+  +  + SK+ G MHACGHD HT  LL  AK+LHQ + +L+GT  ++ Q AEE    GA  MI +G L +++ IFG H+    P G+I    G  +AA   F +KV G+GGH A PH T D +L  S ++ +LQ ++SR+ +P
Sbjct:    3 ISTLQKEINKQLDGCFEEMVEIRRHFHMYPELSFQEEKTAAFIASYYESLGVPIRTNVGGRGVLANIEGSEPGPTVALRADFDALPIQDEKDVPYASKVPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNP 234          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 6.743e-42
Identity = 93/214 (43.46%), Postives = 126/214 (58.88%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI-GSGSRP-VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            LV +RR +H +PEL  +E+ T+A +   L   G+     + KTG+V Q+ G G  P ++A+R DMDALP++E+V     S+  G MHACGHD+HTT+ LG A +L Q   +L G VR LFQPAEE   GA  MI++GA+     I G+H+   IP   +    G   AA     + ++G  GH A PH  ID I  A+ VI ALQQ ISR  +P
Sbjct:   14 LVEIRRHLHAHPELSGQEYQTAAYVAGVLSSCGLHVEEAIGKTGVVGQLSGKGDDPRLLAIRTDMDALPIEEMVSLPFASRHPGVMHACGHDIHTTLGLGTAMVLSQMGHRLPGDVRFLFQPAEEIAQGASWMIQDGAMKGVSHILGVHVFPSIPAQQVGIRYGALTAAADDLEIFIQGESGHGARPHEAIDAIWIAAQVITALQQAISRTQNP 227          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 9.737e-41
Identity = 90/214 (42.06%), Postives = 125/214 (58.41%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQ-IGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++ RR +H +PEL F+E  T+  +   L   G        KT ++A+ IG     VVA+RADMDALP+QE   +E  SK  G MHACGHD HT MLLG AK+  Q +D + G +R LFQ AEE    GA  M++ G +   + + G H+   +  G I  + GP +AA   F +++ G+GGH AMPH TID I   + V+  LQ ++SR  DP
Sbjct:   17 VIAWRRHLHAHPELSFQEEKTAQFVYETLQSFGHLELSRPTKTSVMARLIGQQPGRVVAIRADMDALPIQEENTFEFASKNPGVMHACGHDGHTAMLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDP 230          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni GN=hipO PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 4.091e-39
Identity = 95/215 (44.19%), Postives = 127/215 (59.07%), Query Frame = 1
Query:  145 VRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASI---SGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +R QIHENPEL F+E  T+ L+ ++L + G      + KTG+V  +  G S   + LRADMDALPLQE     +KSK +  MHACGHD HTT LL AAK L        G + + FQPAEEG  GA  MI++G     DS+ +FG H    +P GS        G  +A++  ++++V GRGGH + P    DPI  AS +I+ALQ ++SR  DP
Sbjct:   17 IRHQIHENPELGFDELCTAKLVAQKLKEFGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACGHDGHTTSLLLAAKYL--ASQNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGWH---NMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQSIVSRNVDP 226          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.114e-36
Identity = 85/220 (38.64%), Postives = 130/220 (59.09%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++ L+++RRQ+H+ PE+  EE  T A +  E+DK+  PY      +TGI+  I G   +  +  RAD+D LP+QE V    +SK  G MHACGHD H T+ LG  K L Q++   +     LFQPAEE  AG   M ++ A G+   +  + +H++  +P G+I++  G   AAT   N+ ++G+GGHAA PH   D +L A+++I   Q ++SR  DP
Sbjct:    5 EQEELIAIRRQLHQIPEIGLEEKETQAFLLNEIDKMKQPYLQVRTWQTGILVFIEGKNPQKTIGWRADIDGLPIQEEVVSAFQSKRPGFMHACGHDFHMTIGLGVLKELSQQQP--DNNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDP 222          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.506e-33
Identity = 83/220 (37.73%), Postives = 119/220 (54.09%), Query Frame = 1
Query:  112 SAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD 768
            S + D+  LV  RR +H +PEL FEE  T+ ++R  L  LG+        TG+   +G  +   +ALRAD+DALP+ E      +S++ G  HACGHD HTTML+GAA +L   K      VR++FQPAEE    GA   I  GAL     IF +H D  +  G +++ +GP  ++     V++   GGH A PH T D I   + ++  L  ++ R  D
Sbjct:  413 STELDEKKLVEWRRDLHAHPELSFEERRTTGVVRDHLVGLGLEPVLMPGGTGLWCDVGPETGECIALRADLDALPVAETTGLPFESRVPGVSHACGHDAHTTMLMGAASVL--TKYPPPTRVRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRID 630          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRU0 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dapL PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 9.759e-33
Identity = 79/218 (36.24%), Postives = 121/218 (55.50%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+++RRQ+H+ PE+  EE+ T A +   +++L     +      KTGI+  + G      VA R+DMD LP+ E       SK  G+MHACGHD+H TM LG  + L +++ K    +  +FQPAEE  AG   M + GAL +   + ++ +H+   +P G++AS      A T    V  +G+GGHAA PH   D ++ AS  +  +Q ++SR  DP
Sbjct:    4 LIAIRRQLHQIPEIGLEEYQTQAFLLSVIEQLCQDKPFIQIKTWKTGILVFLKGYAPEKTVAWRSDMDGLPITEETGLAFASKHQGRMHACGHDIHMTMALGLLEALVEKQSK--HNMLFIFQPAEENEAGGMLMYQSGALDEWMPDEVYALHVRPDLPVGTLASNRATLFAGTCEVKVSFKGKGGHAAFPHHANDALVAASYFVTQVQTIVSRNVDP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.174e-32
Identity = 85/216 (39.35%), Postives = 120/216 (55.56%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQIGSGSRPV--VALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PEL F+E  T   I   ++ L   +      KTG++ ++  G  PV  +  RADMD LP+ E   +E  S  +G MHACGHD HTT+ LG   L     D+++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHQIPELGFQEWKTQQYILNYIETLPNEHIEVKTWKTGVIVKV-KGKNPVKTIGYRADMDGLPIVEETGYEFASTHEGMMHACGHDFHTTIGLGL--LTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACHK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis subsp. konkukian GN=dapL PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.843e-32
Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGI----PYAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ FEE  T   I   LD +G          V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFEEWKTQQYI---LDYIGTLLNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
YXEP_BACSU2.556e-4947.14Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]
YHAA_BACSU3.575e-4343.10Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]
Y100_SYNY36.743e-4243.46Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
AMAA_BACST9.737e-4142.06N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
HIPO_CAMJE4.091e-3944.19Hippurate hydrolase OS=Campylobacter jejuni GN=hip... [more]
DAPL_ENTFA1.114e-3638.64Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
CAAL4_RHOSR1.506e-3337.73Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_STRU09.759e-3336.24Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_BACCN2.174e-3239.35Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACHK4.843e-3238.99Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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