DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.326e-32
Identity = 79/215 (36.74%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V++RR +H+ PEL F+E  T   + R +  L          KTGI  ++ G+  R  +  RADMD LP++E     ++SK +G+MHACGHDVH ++ LG   L H     L+  +  +FQPAEEG  GA  M++   + +   + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ A +++  LQ +++R  DP
Sbjct:    8 VAIRRDLHQIPELGFQEFKTQQYLLRYIQSLPQERLQVRTWKTGIFVKVNGTSPRKTIGYRADMDGLPIREETGLPYRSKHEGRMHACGHDVHMSIALGV--LTHFAHHPLKDDLLFVFQPAEEGPGGAKPMLESDIMREWKPDIIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDP 220
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACCZ (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ZK / E33L) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACCQ (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain Q1) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQRYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC7 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain AH187) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQRYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC0 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain AH820) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACAN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACAH (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis (strain Al Hakam) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACAC (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACAA (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain A0248) GN=dapL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.262e-32
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     V+  RAD+D LP+ E   +E  S  +G MHACGHD+HTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 VQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWRTGVIVKVKGKNPEKVIGYRADIDGLPITEETGYEFASVHEGMMHACGHDLHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
[Close]
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain 03BB102) GN=dapL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.079e-31
Identity = 81/215 (37.67%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            + +RR +H+ PE+ F+E  T   I   +  L   +    V +TG++ ++ G     ++  RAD+D LP+ E   +E  S  +G MHACGHDVHTT+ LG   L     ++++  +  LFQPAEEG  GA  M++   L +     I G+HI    P G+IA+  G   A TS   V ++G+GGHAA PH+  D I+ AS ++  LQ +ISR  +P
Sbjct:    7 IQIRRDLHKIPEIGFKEWKTQQYILDYIGTLSNEHVEVKVWETGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEFASIHEGMMHACGHDVHTTIGLGL--LTAAVTERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNP 219
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_GEOKA6.326e-3236.74Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACCZ8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCQ8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC78.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC08.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAN8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAH8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAC8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAA8.262e-3238.14Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC31.079e-3137.67Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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