DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: Y4TI_RHISN (Uncharacterized hydrolase y4tI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01500 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.471e-30
Identity = 76/229 (33.19%), Postives = 123/229 (53.71%), Query Frame = 1
Query:   91 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI---GSGSRPVVALRADMDALPLQELVE-WEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEG-GAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE 762
            + N ++I A++D   ++ +R  +H  PEL   E  T   IR  L++ G+  A     TG+   I    SG +  VA+R D+DALP+QE  +   ++S ++G MHACGHD+H ++ +G A   H+ ++   G +R+ FQPAEE    G   +++E  L   +   G H+   I  G   +  G    ++  F V V G   H + PH+ ID I  A++ +  +Q++ISRE
Sbjct:    9 INNSLLIEAERDA--VLELRHAMHREPELSNNEWKTQQRIRGMLERFGLKGATVFHNTGLYIDIEGSASGPKRAVAVRGDIDALPIQETRDDLPYQSHVEGVMHACGHDLHASIAMGVALAFHRMRNNFAGKLRVFFQPAEEAEPLGGRTVLEERLLEGFDNAVGFHVTPSIQVGKFGAREGAVSKSSDQFKVTVSGSAAHGSTPHNGIDAITIAAAFVNEVQKVISRE 235          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.533e-30
Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V++RR +H+ PEL F+E  T   + R +  L          KTGI  ++ G+  R ++  R D+D LP++E     + S+ +G MHACGHDVH ++ LG   L H  +  ++  +  +FQPAEEG  GA  M++   +     + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ A S++  LQ +++R  DP
Sbjct:    8 VAIRRDLHKIPELGFQEFKTQQYLLRYIHALPQERLEIQTWKTGIFVKVKGTAPRKMIGYRTDIDGLPIKEETGLPYSSEHEGNMHACGHDVHMSIALGL--LTHFAEHPIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDP 220          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.533e-30
Identity = 82/216 (37.96%), Postives = 117/216 (54.17%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQIGSGS-RPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMI--KEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ VRR +H  PEL FEE+ T   +   +  L   +      KTGI+ ++G       VA RADMD LP+ E       S+ +G+MHACGHD+H T+  G   L H    + E  +  +FQPAEEG  GA  M+  +E  +   + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ AS ++  LQ ++SR  DP
Sbjct:    5 LIDVRRALHRIPELGFEEYKTQTYLLDLIQSLPQDFLEVKTWKTGILVRVGGRKGEKTVAYRADMDGLPITEETGLPFVSQHEGRMHACGHDLHMTIAFGL--LRHFAYHQPETHLLFIFQPAEEGPGGAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFANTSELFIDLKGQGGHAAYPHLANDMVVAASHLVTQLQSVVSRNVDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.921e-30
Identity = 81/226 (35.84%), Postives = 126/226 (55.75%), Query Frame = 1
Query:  124 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK-------TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +K+ L+++RR +H  PE+ F+E+ T   +   L++      YP  +       TGI  ++ G+    ++A RAD+DAL ++E       S+  G MHACGHD+H T+ LG     H     ++  +  LFQPAEEG  GA  M++   L     + I  +HI   +P G+I++ SG   A TS   + +EG+GGHAA PH+  D ++ AS+++  LQ +ISR  DP
Sbjct:    2 EKERLIAIRRDLHRIPEIGFQEYKTQQYLLNLLNQ------YPEERIEIETWRTGIFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHPGFMHACGHDMHMTIALGIID--HFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQLQTVISRNTDP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRSV (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus sanguinis (strain SK36) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.319e-29
Identity = 79/218 (36.24%), Postives = 119/218 (54.59%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQR-KDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++RR +H+ PE+  EE+ T A + + +D L  G+ +      +TGI+  I GS     +  R D+D LP+ E    +  S  +G+MHACGHD+H T+ LG   LL Q    +    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+  G   A T    +  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP
Sbjct:    5 LNIRRDLHQIPEIGLEEYKTHAYLMQVIDGLTAGLDFVEIRTWRTGILVFIKGSSPDKTIGWRTDIDGLPIVEDTGLDFASTHEGRMHACGHDMHMTVALG---LLEQAVSTQPTHNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_GEOTN (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.723e-29
Identity = 75/215 (34.88%), Postives = 118/215 (54.88%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-YPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            V++RR +H+ PEL F+E  T   +   +  L          KTGI  ++ G+  R  +  RAD+D LP+ E     ++S+  G+MHACGHDVH ++ LG   L H   + +   +  +FQPAEEG  GA  M++   + +   + I  +HI    P G+IA+  G   A TS   + ++G+GGHAA PH   D ++ A +++  LQ +++R  DP
Sbjct:    8 VAIRRDLHKIPELGFQEFKTQQYLLNYIQSLPQERLDVRTWKTGIFVKVSGTAPRKTIGYRADIDGLPISEETGLPYRSEHAGQMHACGHDVHMSIALGV--LTHFAHNPIRDDLLFIFQPAEEGPGGAKPMLESDIMREWKPDMIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDP 220          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACSU (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus subtilis GN=dapL PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.723e-29
Identity = 81/222 (36.49%), Postives = 121/222 (54.50%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK-------TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+++RR +H  PEL F+E  T   +   L++      YP  +       TG+  ++ G+    ++A RAD+DAL ++E       S+  G MHACGHD+H T+ LG     H     ++  +  LFQPAEEG  GA  M++   L     + I  +HI   +P G+IA+ SG   A TS   + +EG+GGHAA PH   D ++ AS+++  LQ +ISR  DP
Sbjct:    6 LIAIRRDLHRIPELGFQEFKTQQYLLNVLEQ------YPQDRIEIEKWRTGLFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLHMTIALGIID--HFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWQPDFITALHIAPELPVGTIATKSGLLFANTSELVIDLEGKGGHAAYPHLAEDMVVAASTLVTQLQTIISRNTDP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_BACLD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.723e-29
Identity = 79/224 (35.27%), Postives = 121/224 (54.02%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK-------TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEA--IFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            D L ++RR +H+ PEL F+E+ T A +   L K      +P  +       TG+  ++ G+    ++A RADMD L ++E   +   S    +MHACGHD H T+ LG     H  +  ++  +  LFQPAEEG  GA  M++       E   I  +HI   +P G+I + SG   A TS   +++EG+GGHAA PH   D ++ ASS++  +Q +++R  DP
Sbjct:    4 DELAAIRRDLHQIPELGFQEYKTQAYLLNHLAK------HPEGRIEIEKWRTGLFVKVKGTAPEKILAYRADMDGLSIREDTGYSFSSVHQDRMHACGHDFHMTIALGIID--HFVRHPVKQDLLFLFQPAEEGPGGAEPMLESDLFKKWEPSMITALHIAPELPVGTIGTKSGLLFANTSELVIELEGKGGHAAYPHLAEDMVVAASSLVTQMQSIVARNVDP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRTD (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.250e-29
Identity = 77/218 (35.32%), Postives = 115/218 (52.75%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RR +H+ PE+  EE  T A +   + ++  G  +      +TGI+  + GS     +  R D+D LP+ E    + KS  +G+MHACGHD+H T  LG    + Q + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+      G IA+ +    A T    V  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP
Sbjct:    5 LIKIRRDLHQIPEIGLEEFKTQAYLLERIAEMTEGKDFVEQRTWRTGILVFLHGSAPEKTIGWRTDIDGLPIVEETGLDFKSIHEGRMHACGHDIHMTTALGLLDQMLQVQPK--NNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDP 220          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRT2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.250e-29
Identity = 77/218 (35.32%), Postives = 115/218 (52.75%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKL--GIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RR +H+ PE+  EE  T A +   + ++  G  +      +TGI+  + GS     +  R D+D LP+ E    + KS  +G+MHACGHD+H T  LG    + Q + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+      G IA+ +    A T    V  +G+GGHAA PH   D ++ AS  I  +Q ++SR  DP
Sbjct:    5 LIKIRRDLHQIPEIGLEEFKTQAYLLERIAEMTEGKDFVEQRTWRTGILVFLHGSAPEKTIGWRTDIDGLPIVEETGLDFKSIHEGRMHACGHDIHMTTALGLLDQMLQVQPK--NNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDP 220          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
Y4TI_RHISN3.471e-3033.19Uncharacterized hydrolase y4tI OS=Rhizobium sp. (s... [more]
DAPL_GEOSW4.533e-3035.35Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACHD4.533e-3037.96Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACA25.921e-3035.84Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_STRSV1.319e-2936.24Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_GEOTN1.723e-2934.88Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_BACSU1.723e-2936.49Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACLD1.723e-2935.27Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_STRTD2.250e-2935.32Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT22.250e-2935.32Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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