DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRZT (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.488e-28
Identity = 74/219 (33.79%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M + GA GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEAGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRPS (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain CGSP14) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.488e-28
Identity = 74/219 (33.79%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD      +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRALHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.488e-28
Identity = 78/232 (33.62%), Postives = 115/232 (49.57%), Query Frame = 1
Query:  106 MISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDK-----LGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLL--HQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDS---EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            M+S +Q    L+ +RR +H NPE+  +E  T   +  ++ K     L I     +    +V   GS  +  +ALR DMDALP+QE    +  SK D  MHACGHD+H T+ LG       HQ KD L     + FQPAEE   G       G        +  + +H++  +P G IAS  G   A ++   +   G+ GHAA P +  D I+ A++ +  +Q ++SR  DP
Sbjct:    1 MLSDEQ----LIKIRRHLHANPEIGMQEVKTHQFLLEQIAKFPQENLTIETISEIPTALLVRIAGSDPKRTIALRTDMDALPIQEETGLDFASKNDHVMHACGHDIHMTVALGILSYFAKHQPKDNL----LVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDP 224          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRZP (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain P1031) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.542e-28
Identity = 73/219 (33.33%), Postives = 114/219 (52.05%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD      +G+H+   +  G IA+ +      T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFVGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.542e-28
Identity = 70/218 (32.11%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RR +H+ PE+  EE+ TS  + + ++  G+P      K   T I+  + G      +  R D+D LP++E       SK +G+MHACGHD+H T+ LG        + K   T   +FQPAEE  +G   + + G L +   + I+ +H +  +P G+I    G   A T   +VK  G+ GHAA PH   D ++  +  +  +Q ++SR  DP
Sbjct:    8 LIKIRRDLHQIPEIGLEEYETSDYLLKIIN--GLPQENLEIKRWKTAILVHLNGENKNYTIGYRTDIDGLPVEEKTGLPFSSKHEGRMHACGHDIHMTVALGVLSYFASHRPKYNMT--FIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDP 221          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.238e-28
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.238e-28
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.238e-28
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.238e-28
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 7.238e-28
Identity = 81/250 (32.40%), Postives = 128/250 (51.20%), Query Frame = 1
Query:  115 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHI------DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPXXXXXXXXXXXXXXXETCELLPLKA 846
            +++ K  ++ +   +H NPE+ ++E+ T++ ++++L+ LG         TG+V +IGSGS PVVA+RAD+DAL       W+  +      H+CGHD H TM LG   LL ++ +  +GT+R +FQPAEE G GA  MI+EG L D + ++G+H+        G    SI   S  H+  T +      G   H A PH   + I  A+ ++  L  +     DP               E+  ++P KA
Sbjct:    5 SEEMKQTIMDIFEHLHANPEVSWKEYETTSFLKQKLEDLGCRTRTFSDCTGVVGEIGSGS-PVVAVRADIDAL-------WQEVNGTFRANHSCGHDSHMTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTII------GEEAHGARPHLGKNSIEIAAFLVHKLGLI---HIDPQIPHTVKMTKLQAGGESSNIIPGKA 237          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_STRZT2.488e-2833.79Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPS2.488e-2833.79Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_OENOB2.488e-2833.62Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_STRZP5.542e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACS15.542e-2832.11Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRZJ7.238e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR67.238e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ7.238e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP27.238e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
AMHX_BACSU7.238e-2832.40Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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