DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 9.453e-28
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHACGHD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++ A GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRALHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACGHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.235e-27
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQIGSGSRP--VVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+  RR +H+ PE+  EE  T A +   ++KL     +   +T   GI+  +  GS+P   +  R D+D LP+ E       S+  G+MHAC HD H T+ LG  +   + + K    +  LFQPAEE  AG   M ++GA GD   +  +G+H+   +  G IA+ +    A T    ++ +G+GGHAA PH   D ++ AS  +  +Q ++SR  +P
Sbjct:    4 LIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYL-QGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACVHDFHMTIALGCLERALEEQPK--NNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNP 219          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.235e-27
Identity = 76/217 (35.02%), Postives = 116/217 (53.46%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAK---TGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++RR++H+ PE  ++E  T A +   + KL  P  +   K   TGI+  + G+     +  R D+DALP+ E  E    SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKL--PSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.235e-27
Identity = 73/218 (33.49%), Postives = 118/218 (54.13%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            ++ + +RR++H+ PE  F+E  T A I  ++        +Y   +TG+  ++ G      +  RAD+D LP++E       S+  G MHACGHDVH ++ LG  + + +    +   V  LFQPAEEG  GA  MIK           ++G+H+    P G+IAS  G   A+    ++ + G+ GHAA PH TID ++  +++I+ LQ ++SR  +P
Sbjct:    2 EYAIEMRRELHKIPEPGFKEFKTQAFILDQIRSYPEDRVSYDTFETGVFVRVKGLTGNRTIGYRADIDGLPIEEATGLPFCSEHPGFMHACGHDVHASIALGLLRRIVELP--VMDDVVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVHITIYGQSGHAAFPHLTIDTVVAQAALIMQLQTIVSRSINP 217          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LACLS (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.612e-27
Identity = 73/218 (33.49%), Postives = 116/218 (53.21%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RRQ+H+ PE+  EEH T   +   + ++    ++      +TGI+  + GS  +  +  R D+D LP++EL      SK +G+MHACGHD+H T+ LG  + L + + K    +  LFQPAEE  AG   M   GA  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  +  +Q ++SR  DP
Sbjct:    4 LIEIRRQLHQIPEIGLEEHKTQKYLLTIIHQIIQNKSFIQVETWQTGILVYLKGSQGQKTIGWRTDIDGLPVEELTNLPFASK-NGRMHACGHDIHMTVALGLLEKLSESQPK--NNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.750e-27
Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RRQ+H+ PE+  EEH T   +   + ++    ++      +TG++  + GS  +  +  R D+D LP++EL      SK +G+MHACGHD+H T+ LG  + L + + K    +  LFQPAEE  AG   M   GA  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  +  +Q ++SR  DP
Sbjct:    4 LIEIRRQLHQIPEIGLEEHKTQKYLLTIIHQIIQNKSFIQVETWQTGLLVYLKGSQGQKTIGWRTDIDGLPVEELTNLPFASK-NGRMHACGHDIHMTVALGLLEKLSESQPK--NNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LISMH (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.127e-27
Identity = 73/215 (33.95%), Postives = 114/215 (53.02%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGNNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LISMF (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.127e-27
Identity = 73/215 (33.95%), Postives = 114/215 (53.02%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LISMC (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.127e-27
Identity = 73/215 (33.95%), Postives = 114/215 (53.02%), Query Frame = 1
Query:  139 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA-KTGIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +++RR++H+ PE  ++E  T A +   + KL   +      +TGI+  + G+     +  R D+DALP+ E       SK  G MHACGHD+H ++ LG   L H      +  +  +FQPAEEG  GA  +++     +   ++I+G+HI      G IA   G   A TS   +  +G+GGHAA PH   D ++ AS+ +  +Q +ISR  DP
Sbjct:    6 IAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIALGV--LTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP 218          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.127e-27
Identity = 72/218 (33.03%), Postives = 117/218 (53.67%), Query Frame = 1
Query:  136 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKT---GIVAQI-GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGD--SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            L+ +RRQ+H+ PE+  EE+ T   +   + +L     +   +T   GI+  + GS S+  +  R D+D LP++EL +  + SK +G+MHACGHD+H T+ LG  + + + + +    +  LFQPAEE  AG   M    A  +   +  +G+H+   +  G IA+      A T    +   G GGHAA PH+  D ++ A+  I  +Q ++SR  DP
Sbjct:    4 LIEIRRQLHQIPEIGLEEYETQKYLLAIIQELTQNKPFIQVRTWQTGILVYLAGSQSQKTIGWRTDIDGLPIEELTDLPYASK-NGRMHACGHDIHMTVALGLLEKMSESQPR--DNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDP 218          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
DAPL_STRPI9.453e-2833.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPN1.235e-2733.33Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LISMO1.235e-2735.02Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_EXIS21.235e-2733.49Putative N-acetyldiaminopimelate deacetylase OS=Ex... [more]
DAPL_LACLS1.612e-2733.49Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLM2.750e-2733.03Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LISMH6.127e-2733.95Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMF6.127e-2733.95Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMC6.127e-2733.95Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LACLA6.127e-2733.03Putative N-acetyldiaminopimelate deacetylase OS=La... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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