DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 50/190 (26.32%), Postives = 84/190 (44.21%), Query Frame = 1
Query:   46 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            C V      +  +   V  HG +DI+ +NA +     + ++D  +  +++ L +NV    L  K     M     GS++                Y  +K A+LGLTK  A+EL    IRVNCL+P  + T  +       D++ E  M     ++ +    ED A    +L S++A Y++G  + + GG
Sbjct:   70 CHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGS-LMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRML--WMDKEKEESMKETLRIRRLG-EPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHB8_CANFA (Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 50/191 (26.18%), Postives = 95/191 (49.74%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKL-DIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARS-GSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            DV+    ++  ++Q  A   +   ++ + AG+       ++   + D++RV++VN+ G+FL  + AA+ ++ +   GSI+                Y  +K  V+GLT+ AA ELG+ GIR N + P  + TP+         + + G +       G     ED+A A  +LAS+++ Y++G ++ + GG
Sbjct:   73 DVSEAGAVRRLLEQVQACFSRPPSVVVSCAGL--TRDEFLLRMSEDDWDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFITTPMTQKVPQKVLDKVIGMIP-----MGHLGDPEDVADAVTFLASEDSGYITGASVEVTGG 256          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: SOU1_CANAL (Sorbose reductase SOU1 OS=Candida albicans GN=SOU1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11
Identity = 52/208 (25.00%), Postives = 93/208 (44.71%), Query Frame = 1
Query:    4 VVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSIL--XXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            + E  G    +Y  C+VT+ + +   I++     G +DI   NAG+   +   I       +++++  ++ GV+       ++    +SGS++                  Y  AK A   L K+ +VE   FG RVN +SP  + T +A       D +++        L G     +++  A LYLAS+ + Y +G N+ +DGG+T
Sbjct:   78 LTEKYGVKAKAY-KCNVTDPNDVSKVINEIEKDFGTIDIFVANAGVAWTDGPEIDVQGYDQWKKIVDCDLNGVYYCAHTVGQIFKKNKSGSLIITSSMSGTIVNIPQLQAPYNAAKAACTHLAKSLSVEWASFGARVNSISPGYILTDIA----DFADPEMKKKWWQLTPL-GREGLPQELVGAYLYLASNASTYTTGSNIAVDGGYT 279          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 57/207 (27.54%), Postives = 96/207 (46.38%), Query Frame = 1
Query:    1 SVVESIGTSNSSY--VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE+I  +      V  DV+     +  ++  V   G+LD++ NN+G+       I +  +  + R+  VNV GV L  + A++ +     GSI+                Y   K A+  ++   A EL    IRVN +SP  + T   T   GI   ++E  + +   L G + + +DIA    +LASD+A++V+G  +   GG
Sbjct:   46 AVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQFGRLDVLVNNSGV--YEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASKHL--GEGGSIINISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVTE-GTHTAGIAGSEMEAGLVAQTPL-GRSGQPDDIAGVVAFLASDDARWVTGEVINASGG 246          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: PECR_PONAB (Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo abelii GN=PECR PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 51/209 (24.40%), Postives = 91/209 (43.54%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIVNPSLGMFQYPD 660
            + C++ NE  + N +  T+   GK++ + NN G    +    I ++   +  VL  N+TG F   K      +    GSI+                   A+  V  LTK+ A+E    G+R+NC++P  + +  A    G   +    E F    A   GV    E+++    +L S  A +++G ++ +DGG ++   S   ++ PD
Sbjct:   77 IQCNIRNEEEVNNLVKSTLDIFGKINFLVNNGGGQFLSLAEHISSK--GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVSIKTGLPLAVHS-GAARAGVYNLTKSLALEWACSGVRINCVAPGVIYSQTAVENYGSYGQSFFEESFQKIPAKRIGV---PEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHS---YEIPD 276          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 45/152 (29.61%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  163 IIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARS-GSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            ++   + D++RV++VN+ G FL  + AA+ ++ +   GSI+                Y  +K  V+GLT+ AA ELG+ GIR N + P  +ATP+         E ++  + +   L G     ED+A    +LAS+++ Y++G ++ + GG
Sbjct:  110 LLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKM----PEKVKDKVTAMIPL-GHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 256          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHB8_MOUSE (Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 45/152 (29.61%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  163 IIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARS-GSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            ++   + D++RV++VN+ G FL  + AA+ ++ +   GSI+                Y  +K  V+GLT+ AA ELG+ GIR N + P  +ATP+         E ++  + +   L G     ED+A    +LAS+++ Y++G ++ + GG
Sbjct:  111 LLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIIGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKM----PEKVKDKVTAMIPL-GHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 257          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 52/181 (28.73%), Postives = 85/181 (46.96%), Query Frame = 1
Query:   79 AIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGF 618
            A ++ +   G +D++ NNA +  A     +D  K  F+R  +VN+  VF   +  AR MI     GSI+                Y   K A+  LTK+ A+ELG   IRVN ++P  + T +  S    +D +L   +     ++      ED+  + L+L SD +   SG ++F+D G+
Sbjct:   66 ATERALGGVGPVDLLVNNAAV--ALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSVT--SDPELARKLKERHPMRKFA-EVEDVVNSILFLLSDRSASTSGSSIFVDAGY 241          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.682e-11
Identity = 52/191 (27.23%), Postives = 87/191 (45.55%), Query Frame = 1
Query:   46 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTL-RTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            C V      +  +   +  HG +DI+ +NA +      +++D  +  ++++L +NV  + L  K     M     GS++                Y  +K A++GLTKN A+EL    IRVNCL+P      + TSF     ED     N    L+   L + E+ A    +L S++A Y++G  + + GG
Sbjct:   70 CHVGKAEDRERLVATALNLHGGIDILVSNAAVNPFFG-KLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGL----IKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAGG 255          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: YUXG_BACSU (Uncharacterized oxidoreductase yuxG OS=Bacillus subtilis GN=yuxG PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 58/213 (27.23%), Postives = 93/213 (43.66%), Query Frame = 1
Query:   10 ESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVM-IPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLA----------TSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            ++ G   +  V  DVT E  +++A ++    +G +DI+ NNAG+  A  +   +    ++   ++V  TG FL  + A + M    R GS++                Y   K     L +  A E G+FGIRVN + P A+    A           +  GI  + LE        L  V +  EDIA A  + AS +A+  +G  + +DGG
Sbjct:  473 DAYGKGRAMAVKMDVTKEEDVQSAFERAALAYGGIDIVVNNAGL--ATSSPFDETSLKEWNLNMNVLGTGYFLVAREAFKQMKHQNRGGSMVFVGSKNSVYAGKNASAYSSVKALETHLARCIAAEGGEFGIRVNSVLPDAVLQGSAIWGSSWREERAAAYGIEPDQLEEHYRKRTALL-VNIYPEDIAEAIAFFASSKAEKTTGCMITVDGG 682          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
DHRS4_PONAB3.000e-1126.32Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHB8_CANFA3.000e-1126.18Estradiol 17-beta-dehydrogenase 8 OS=Canis familia... [more]
SOU1_CANAL3.918e-1125.00Sorbose reductase SOU1 OS=Candida albicans GN=SOU1... [more]
Y182_METEA5.117e-1127.54Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
PECR_PONAB5.117e-1124.40Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo a... [more]
DHB8_RAT5.117e-1129.61Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]
DHB8_MOUSE5.117e-1129.61Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus ... [more]
CBR2_PIG5.117e-1128.73Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
DHRS4_RABIT6.682e-1127.23Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
YUXG_BACSU8.728e-1127.23Uncharacterized oxidoreductase yuxG OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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