DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18
Identity = 59/199 (29.65%), Postives = 99/199 (49.75%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTL----RTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            V  DV+N   ++N I +T++    +DI+ NNAGI   N   I+  ++ +++ V+++N+ GVF   K   R M+  RSG I+                Y  AK  V+GLTK++A EL    I VN ++P  ++T +         +++         LK + L       D++    +LAS+ A+Y++G  L IDGG  +
Sbjct:   59 VKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDN--LIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEM---------LKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMVM 246          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18
Identity = 64/197 (32.49%), Postives = 94/197 (47.72%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL-ATSFVGITDE-DLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            V  DVT E  +KN +   +   G LDIM NNAG+   N     +    D+++V+  N+TG FLG + A +  +     G+++                Y  +K  +  +T+  A+E    GIRVN + P A+ TP+ A  F     + D+E  +       G     E+IA  A +LAS EA YV+G  LF DGG T
Sbjct:   62 VQGDVTKEEDVKNIVQTAIKEFGTLDIMINNAGL--ENPVPSHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPM-----GYIGEPEEIAAVAAWLASKEASYVTGITLFADGGMT 251          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18
Identity = 61/192 (31.77%), Postives = 92/192 (47.92%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            DVT ES + N +   +   GKLD+M NNAG+   N     +   +D+ +V+  N+TG FLG + A +  +     G+++                Y  +K  +  +T+  A+E    GIRVN + P A+ TP+        D +    + S   + G     E+IA  A +LAS EA YV+G  LF DGG T
Sbjct:   65 DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18
Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            DVT ES + N +  ++   GKLD+M NNAG+   N     +   +D+ +V+  N+TG FLG + A +  +     G+++                Y  +K  +  +T+  A+E    GIRVN + P A+ TP+        D +    + S   + G     E+IA  A +LAS EA YV+G  LF DGG T
Sbjct:   65 DVTVESDVINLVQSSIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18
Identity = 65/215 (30.23%), Postives = 104/215 (48.37%), Query Frame = 1
Query:   10 ESIGTSNSSYVH--CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFV-------GITDEDL--EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            E  G S+ + +H   D+T  S I + +       G  DI+ NNAG+    K  I D     ++R+++VN++  F  I+ A   M     G I+                Y  AKH ++GLTK  A+E+ + G+ VN + P  + TPL    +       GIT+E +  E  +      K +T+  E +A  ALYLA D+A  ++G ++ +DGG+T
Sbjct:   46 EVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEK--IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITV--EQVASLALYLAGDDAAQITGTHVSMDGGWT 256          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FABG_BACSU5.644e-1829.653-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
DHG_BACSU7.371e-1832.49Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
DHG_BACME7.371e-1831.77Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
DHG1_BACME7.371e-1831.77Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
BDHA_RHIME9.627e-1830.23D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
BUTA_STAAW1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAR1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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