DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.642e-17
Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL--------EGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +  DV+N   + NA+ QT A  G   +M NNAG+G       I  E+  F+ V  VNV GV  GI+ A          G I+                YC  K AV GLT+ AA +L   GI VN  +P  + TP+  S    T E+         E F +  A   G   + ED++    +LA  ++ Y++G  + +DGG
Sbjct:   58 IKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQ--FKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIA--LGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.145e-17
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1
Query:   37 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGI---GGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            ++  DVT+ +   NAI   V   G L  + N AGI   GG  +  I       + ++++VN T +FLGIK A   ++ + +GSI+                YC  K AV  ++K AA+E    G+RVN + P  + TP+  +       D+     S   + G      DIA  AL+LASDEAKY++G +L IDGG+++
Sbjct:   60 FIRLDVTDAASWNNAIAAAVDGFGGLTTLSNTAGIIHPGGFEEESI-----EGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITAN----VPPDVLKQQTSQIPM-GKLGDPIDIANGALFLASDEAKYITGVDLPIDGGWSV 248          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.145e-17
Identity = 58/197 (29.44%), Postives = 99/197 (50.25%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKAD-FERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 627
            V  DV +E  +  AI  T+   G +D++ NNAGI G ++  ++     + F++V++VNV G+FLG +     M+   +G I+                Y  +K AVL LTK+ AV+    GIR N + P  + TP+      +   +L   + +    K +    + +A A ++LA ++A YV+G  L +DG +T +
Sbjct:   57 VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ--WRLDQPELRDQVLARIPQKEIGTAAQ-VADAVMFLAGEDATYVNGAALVMDGAYTAI 250          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.145e-17
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1
Query:    1 SVVESIGTSN--SSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I      S  +  +V     +K  I + V+  G +D++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+     M+  RSG+I+                Y   K  V+GLTK AA EL   GI VN ++P  + + +  +      +DL+  M     LK     T DIA    +LASD+AKY++G  + ++GG
Sbjct:   42 AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNAL----SDDLKDQMLEQIPLKRFGEDT-DIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.145e-17
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 1
Query:    1 SVVESIGTSN--SSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I      S  +  +V     +K  I + V+  G +D++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+     M+  RSG+I+                Y   K  V+GLTK AA EL   GI VN ++P  + + +  +      +DL+  M     LK     T DIA    +LASD+AKY++G  + ++GG
Sbjct:   42 AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNAL----SDDLKDQMLEQIPLKRFGEDT-DIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
BUTA_STAAC1.642e-1731.34Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
LINX_PSEPA2.145e-1733.172,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
HCDR_XANP22.145e-1729.442-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG_STAES2.145e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ2.145e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAW2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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