DY258873

Overview
NameDY258873
Unique NameDY258873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length841
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1
Query:    1 SVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VVE I     +S  +  +V +   +K  I + V+  G LD++ NNAGI   N   ++  ++ +++ V+  N+ GVF  I+ A   M+  RSG+I+                Y   K  V+GLTK+AA EL   GI VN ++P  + + +  +      ++L+  M +   L      T DIA    +LASD+AKY++G  + ++GG
Sbjct:   44 AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.801e-17
Identity = 60/204 (29.41%), Postives = 101/204 (49.51%), Query Frame = 1
Query:   25 SNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL-EGFMNSAAN--LKGVTL----RTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            S  S+   DV+    +   + + +A +G +D++ NNAGI     + ++   + ++  V+  N+  ++       R MI ARSG+I+                Y  AK  ++G +K  + E+G   IRVNC++P            G  D D+ +G  ++  N  LKGV L      E+IA AAL+LAS+++ Y++G  L +DGG
Sbjct:   57 SKVSFALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAGI--TRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAP------------GFIDTDMTKGLSDNLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGG 246          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.240e-17
Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALA-TPLATSFVGIT-DEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 627
            V  DVT+E+ I  A+       G L  + NNAGI G       + E   + R+++VNVTG FL  K A   M+    G+I+                YC AK AV+ LT+  A +    GIRVN + P  +A T +    +G   D +LE     A    G     EDIA AA++L S +A +V+G  L +DGG T +
Sbjct:   55 VGADVTDEAAITAAMAGAQRALGPLTGLVNNAGIAGFGSVHATEVET--WSRIMAVNVTGTFLASKAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCPGTVAGTDMGRQLLGTDCDPELEA-RRLAKYPMGRFGTPEDIAEAAVFLLSTKAAFVTGSVLAVDGGMTAI 249          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.150e-17
Identity = 63/201 (31.34%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSI-LXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITD-EDLEGFMNSAANLKGVTLR----TEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            V  DV + + ++ A+ +   T G++DI+ NNAG+        +  E  DF   + +N+ GV+   K     MI  + G I +                Y  +K A++GLTK+ AVE  Q GIRVN + P  + TP+A S    ++ +D E  +   A  K + LR      ++   A +LASDE+ Y++G    IDGG T+
Sbjct:   59 VKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRDFH--IDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA--KAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL 255          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.150e-17
Identity = 63/201 (31.34%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSI-LXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITD-EDLEGFMNSAANLKGVTLR----TEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            V  DV + + ++ A+ +   T G++DI+ NNAG+        +  E  DF   + +N+ GV+   K     MI  + G I +                Y  +K A++GLTK+ AVE  Q GIRVN + P  + TP+A S    ++ +D E  +   A  K + LR      ++   A +LASDE+ Y++G    IDGG T+
Sbjct:   59 VKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRDFH--IDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA--KAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL 255          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.150e-17
Identity = 59/195 (30.26%), Postives = 93/195 (47.69%), Query Frame = 1
Query:   40 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            V  DVT E  + N ++  V   G LD+M NNAG+     +  +  E  ++ +V+  N+TG FLG + A +  +     G+++                Y  +K  +  +T+  A+E    GIRVN + P A+ TP+        D +    + S   + G   + E+IA  A +LAS +A YV+G  LF DGG T
Sbjct:   62 VRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLE--NWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAE--KFADPEQRADVESMIPM-GYIGKPEEIASVAAFLASSQASYVTGITLFADGGMT 251          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.390e-16
Identity = 65/223 (29.15%), Postives = 108/223 (48.43%), Query Frame = 1
Query:    7 VESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGAN--KTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIP-----ARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL----------ATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            VE++G   +  +H DV +   +   +D+ V+T G+LDI+  NAGI         I DN    + +++ +N+TGV+    H A+V +P      R GSI+                Y  AKH V+GL ++ A+EL    +RVN L P  + TP+          +      T ED E    +   L    + + D++ A L+L S++A+Y++G  + +D G T+
Sbjct:   62 VENLGRK-AIVIHADVRDLESLTAEVDRAVSTLGRLDIVSANAGIASVPFLSHDIPDNT---WRQMIDINLTGVW----HTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHPTQVNTPMIQNEGTYRIFSPDLENPTREDFEIASTTTNALPIPWVESVDVSNALLFLVSEDARYITGAAIPVDAGTTL 276          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.816e-16
Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = 1
Query:   73 KNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXX-YCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFV---GITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 624
            K  IDQ      +LD++FN AG    +   ++D E+ D++  +++NV  ++L IK     M+  +SG+I+                 Y   K AV+GLTK+ A +  Q GIR NC+ P  + TP     +   G  +E    F+      +  T   E+IA   +YLASDE+ YV+G+ + IDGG+++
Sbjct:   62 KKQIDQFANEVERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFAT--AEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.371e-16
Identity = 66/196 (33.67%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   37 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKAD-FERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 621
            Y H DVT E   +  +       G +D + NNAGI        ++ E  + F +V+ +N+TGVF+G+K     M  A  GSI+                Y  +K  V GL+K AAVELG   IRVN + P    TP+ T+  GI   +   + N+     G      +IA A + L SD + YV+G  L +DGG+T
Sbjct:   56 YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG---MFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-TAETGIRQGE-GNYPNTPMGRVG--NEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 244          
BLAST of DY258873 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.371e-16
Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 1
Query:   49 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKT-RIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 615
            +VT++  I+  ++Q     G +DI+ NNAGI   N   R+ D E  D   ++  N+T V+   K   R M+  R G I+                YC AK  V+G +K+ A E+   GI VN ++P  +AT +      +TDE   G +++     G     +DIA A  +LASD+A Y++G  L ++GG
Sbjct:   57 NVTDKESIETLLEQIKNDFGDIDILVNNAGITRDNLLMRMKDEEWFD---IMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEV---LTDEQKAGILSNVP--AGRLGEAKDIAKAVAFLASDDAGYITGTTLHVNGG 238          
The following BLAST results are available for this feature:
BLAST of DY258873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FABG_STAAC2.801e-1730.433-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_CHLMU2.801e-1729.413-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
HCDS_XANP26.240e-1734.342-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
UCPA_SALTY8.150e-1731.34Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI8.150e-1731.34Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
DHG2_BACME8.150e-1730.26Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
LIMC_RHOER1.390e-1629.15(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
BDH2_HUMAN1.816e-1631.913-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
HSD_STREX2.371e-1633.673-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_HAEIN2.371e-1632.113-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258873 ID=DY258873; Name=DY258873; organism=Citrus clementina; type=EST; length=841bp
TCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCGA
TGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCAA
CTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGCT
AACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCCT
GAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGTG
TCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAGC
TCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATGC
TGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGGA
TTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTACC
AGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAGC
GGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCAG
CTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCTT
TTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTCA
GTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCCA
TTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATCC
TTGATATCGAATGAAACAAAATTGAACAAGTTTTTTTTCATTCCTAGACT
CCTTAAAAAAGAAATTATTTCCAAAACGAAACCTTGAGTTT
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